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polr2l polr2l polr2c polr2c nup35 nup35 H3-3B H3-3B sec13 sec13 LOC103395050 LOC103395050 tnrc6a tnrc6a LOC103385172 LOC103385172 LOC103396557 LOC103396557 nup153 nup153 LOC103394976 LOC103394976 nup214 nup214 polr2k polr2k Tpr Tpr Nup155 Nup155 ENSCSEP00000026221 ENSCSEP00000026221 ADGRD1 ADGRD1 Ndc1 Ndc1 nup188 nup188 polr2h polr2h ENSCSEP00000023097 ENSCSEP00000023097 ENSCSEP00000023079 ENSCSEP00000023079 HIST1H4J HIST1H4J ENSCSEP00000023037 ENSCSEP00000023037 ENSCSEP00000023029 ENSCSEP00000023029 ENSCSEP00000010656 ENSCSEP00000010656 polr2f polr2f ENSCSEP00000010689 ENSCSEP00000010689 ENSCSEP00000010737 ENSCSEP00000010737 ran ran POLR2E POLR2E nup88 nup88 LOC103396892 LOC103396892 ENSCSEP00000012570 ENSCSEP00000012570 nup58 nup58 LOC103395080 LOC103395080 ENSCSEP00000014012 ENSCSEP00000014012 ENSCSEP00000014019 ENSCSEP00000014019 H3C14 H3C14 ENSCSEP00000014113 ENSCSEP00000014113 ENSCSEP00000014187 ENSCSEP00000014187 ipo7 ipo7 nup133 nup133 LOC103396322 LOC103396322 polr2g polr2g LOC103381709 LOC103381709 nup85 nup85 LOC103392282 LOC103392282 seh1l seh1l nup42 nup42 ENSCSEP00000022787 ENSCSEP00000022787 NUP54 NUP54 nup210 nup210 LOC103397872 LOC103397872 polr2j polr2j nup160 nup160 ENSCSEP00000033464 ENSCSEP00000033464 nup93 nup93 ENSCSEP00000010388 ENSCSEP00000010388 LOC103399096 LOC103399096 nup98 nup98 polr2d polr2d NUP62 NUP62 polr2b polr2b rae1 rae1 nup37 nup37 ENSCSEP00000006378 ENSCSEP00000006378 ENSCSEP00000006355 ENSCSEP00000006355 ENSCSEP00000006303 ENSCSEP00000006303 ENSCSEP00000006274 ENSCSEP00000006274 nup50 nup50 nup205 nup205 nup107 nup107 nup43 nup43 ipo8 ipo8 LOC103381127 LOC103381127 ENSCSEP00000005051 ENSCSEP00000005051 polr2a polr2a polr2i polr2i
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
nup35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (298 aa)
H3-3BHistone H3.3. (136 aa)
sec13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (320 aa)
LOC103395050Histone H2A; Belongs to the histone H2A family. (131 aa)
tnrc6aTrinucleotide repeat containing adaptor 6A. (1870 aa)
LOC103385172Histone H2A; Belongs to the histone H2A family. (128 aa)
LOC103396557Translocated promoter region a, nuclear basket protein. (2514 aa)
nup153Nucleoporin 153. (1445 aa)
LOC103394976Histone H3; Belongs to the histone H3 family. (136 aa)
nup214Nup214_FG domain-containing protein. (2068 aa)
polr2kPolymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
TprTranslocated promoter region b, nuclear basket protein. (2370 aa)
Nup155Nucleoporin 155. (1174 aa)
ENSCSEP00000026221Uncharacterized protein. (78 aa)
ADGRD1Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family. (770 aa)
Ndc1NDC1 transmembrane nucleoporin. (654 aa)
nup188Nucleoporin 188. (1748 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (155 aa)
ENSCSEP00000023097Histone H2B; Belongs to the histone H2B family. (114 aa)
ENSCSEP00000023079Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
HIST1H4JHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
ENSCSEP00000023037annotation not available (67 aa)
ENSCSEP00000023029Histone H2B; Belongs to the histone H2B family. (113 aa)
ENSCSEP00000010656Histone domain-containing protein. (119 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
ENSCSEP00000010689Histone H2B; Belongs to the histone H2B family. (114 aa)
ENSCSEP00000010737Histone H2B; Belongs to the histone H2B family. (117 aa)
ranGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (259 aa)
POLR2ERNA polymerase II subunit E. (229 aa)
nup88Nucleoporin 88. (474 aa)
LOC103396892Histone H2A; Belongs to the histone H2A family. (257 aa)
ENSCSEP00000012570Histone H2A; Belongs to the histone H2A family. (218 aa)
nup58Nucleoporin 58. (592 aa)
LOC103395080POM121 transmembrane nucleoporin. (1185 aa)
ENSCSEP00000014012Histone H2A; Belongs to the histone H2A family. (131 aa)
ENSCSEP00000014019Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (89 aa)
H3C14Histone domain-containing protein. (122 aa)
ENSCSEP00000014113Histone domain-containing protein; Belongs to the histone H2B family. (109 aa)
ENSCSEP00000014187Histone H3; Belongs to the histone H3 family. (113 aa)
ipo7Importin 7. (1039 aa)
nup133Nucleoporin 133. (1151 aa)
LOC103396322Histone H2B; Belongs to the histone H2B family. (116 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (190 aa)
LOC103381709Histone H3; Belongs to the histone H3 family. (136 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (652 aa)
LOC103392282RAN binding protein 2. (3022 aa)
seh1lSEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (383 aa)
nup42Nucleoporin 42. (434 aa)
ENSCSEP00000022787Histone H2A; Belongs to the histone H2A family. (130 aa)
NUP54Nucleoporin 54. (584 aa)
nup210Nucleoporin 210. (1835 aa)
LOC103397872Histone H2A.V. (128 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
nup160Nucleoporin 160. (1083 aa)
ENSCSEP00000033464Achalasia, adrenocortical insufficiency, alacrimia. (399 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (826 aa)
ENSCSEP00000010388Histone H2B; Belongs to the histone H2B family. (122 aa)
LOC103399096Histone H2A; Belongs to the histone H2A family. (133 aa)
nup98Nucleoporin 98. (1838 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (144 aa)
NUP62Nucleoporin 62. (561 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
rae1Ribonucleic acid export 1. (368 aa)
nup37Nucleoporin 37. (364 aa)
ENSCSEP00000006378Histone H3; Belongs to the histone H3 family. (126 aa)
ENSCSEP00000006355Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (147 aa)
ENSCSEP00000006303Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (95 aa)
ENSCSEP00000006274Histone H2B; Belongs to the histone H2B family. (114 aa)
nup50Nucleoporin 50. (508 aa)
nup205Nucleoporin 205. (1991 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (884 aa)
nup43Nucleoporin 43. (346 aa)
ipo8Importin 8. (1016 aa)
LOC103381127Histone H2A; Belongs to the histone H2A family. (128 aa)
ENSCSEP00000005051Histone H2B; Belongs to the histone H2B family. (112 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1965 aa)
polr2iPolymerase (RNA) II (DNA directed) polypeptide I. (287 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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