24 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	poli	Polymerase (DNA directed) iota. (726 aa)
	rpa2	Replication protein A2. (274 aa)
	meiob	Methionine sulfoxide reductase B1b. (436 aa)
	rfc4	Replication factor C (activator 1) 4. (358 aa)
	rfc2	Replication factor C (activator 1) 2. (355 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	rfc3	Replication factor C (activator 1) 3. (356 aa)
	LOC103395242	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (633 aa)
	ENSCSEP00000023759	Ubiquitin-like domain-containing protein. (92 aa)
	RCBTB1	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (637 aa)
	rfc1	Replication factor C subunit 1. (1083 aa)
	kxd1	KxDL motif containing 1. (180 aa)
	ENSCSEP00000009964	Uncharacterized protein. (85 aa)
	rcbtb2	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. (554 aa)
	ENSCSEP00000011696	Uncharacterized protein. (103 aa)
	rfc5	Replication factor C (activator 1) 5. (338 aa)
	ENSCSEP00000020096	Uncharacterized protein. (707 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	mad2l2	Mitotic arrest deficient 2 like 2. (210 aa)
	rev1	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1175 aa)
	UBB	Ubiquitin B. (744 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (151 aa)
	ENSCSEP00000027086	REV3 like, DNA directed polymerase zeta catalytic subunit. (2816 aa)
	rpa1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000009964	ENSCSEP00000011696	ENSCSEP00000009964	ENSCSEP00000011696	Uncharacterized protein.	Uncharacterized protein.	0.734
ENSCSEP00000009964	ENSCSEP00000020096	ENSCSEP00000009964	ENSCSEP00000020096	Uncharacterized protein.	Uncharacterized protein.	0.647
ENSCSEP00000009964	ENSCSEP00000027086	ENSCSEP00000009964	ENSCSEP00000027086	Uncharacterized protein.	REV3 like, DNA directed polymerase zeta catalytic subunit.	0.722
ENSCSEP00000009964	LOC103395242	ENSCSEP00000009964	ENSCSEP00000019947	Uncharacterized protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.973
ENSCSEP00000009964	UBB	ENSCSEP00000009964	ENSCSEP00000025180	Uncharacterized protein.	Ubiquitin B.	0.653
ENSCSEP00000009964	mad2l2	ENSCSEP00000009964	ENSCSEP00000006059	Uncharacterized protein.	Mitotic arrest deficient 2 like 2.	0.664
ENSCSEP00000009964	meiob	ENSCSEP00000009964	ENSCSEP00000001347	Uncharacterized protein.	Methionine sulfoxide reductase B1b.	0.962
ENSCSEP00000009964	pcna	ENSCSEP00000009964	ENSCSEP00000030429	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.728
ENSCSEP00000009964	poli	ENSCSEP00000009964	ENSCSEP00000029614	Uncharacterized protein.	Polymerase (DNA directed) iota.	0.654
ENSCSEP00000009964	rfc1	ENSCSEP00000009964	ENSCSEP00000007615	Uncharacterized protein.	Replication factor C subunit 1.	0.692
ENSCSEP00000009964	rfc2	ENSCSEP00000009964	ENSCSEP00000029824	Uncharacterized protein.	Replication factor C (activator 1) 2.	0.832
ENSCSEP00000009964	rfc3	ENSCSEP00000009964	ENSCSEP00000019462	Uncharacterized protein.	Replication factor C (activator 1) 3.	0.752
ENSCSEP00000009964	rfc4	ENSCSEP00000009964	ENSCSEP00000000657	Uncharacterized protein.	Replication factor C (activator 1) 4.	0.882
ENSCSEP00000009964	rfc5	ENSCSEP00000009964	ENSCSEP00000032718	Uncharacterized protein.	Replication factor C (activator 1) 5.	0.734
ENSCSEP00000009964	rpa1	ENSCSEP00000009964	ENSCSEP00000020488	Uncharacterized protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.973
ENSCSEP00000009964	rpa2	ENSCSEP00000009964	ENSCSEP00000029823	Uncharacterized protein.	Replication protein A2.	0.936
ENSCSEP00000009964	rps27a	ENSCSEP00000009964	ENSCSEP00000002392	Uncharacterized protein.	Ribosomal protein S27a.	0.684
ENSCSEP00000011696	ENSCSEP00000009964	ENSCSEP00000011696	ENSCSEP00000009964	Uncharacterized protein.	Uncharacterized protein.	0.734
ENSCSEP00000011696	ENSCSEP00000020096	ENSCSEP00000011696	ENSCSEP00000020096	Uncharacterized protein.	Uncharacterized protein.	0.964
ENSCSEP00000011696	ENSCSEP00000027086	ENSCSEP00000011696	ENSCSEP00000027086	Uncharacterized protein.	REV3 like, DNA directed polymerase zeta catalytic subunit.	0.745