17 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSCSEP00000029254	Josephin domain containing 2. (124 aa)
	LOC103377326	Ataxin 3. (350 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	LOC103399826	RAD23 homolog A, nucleotide excision repair protein b. (386 aa)
	prkn	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (447 aa)
	SPATA5	Spermatogenesis associated 5. (886 aa)
	kxd1	KxDL motif containing 1. (180 aa)
	LOC103397105	Uncharacterized protein; Belongs to the AAA ATPase family. (806 aa)
	spata5l1	Spermatogenesis associated 5-like 1. (748 aa)
	LOC103398200	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	aspdh	Aspartate dehydrogenase domain containing. (278 aa)
	LOC103393630	Ubiquitin-like domain-containing protein. (179 aa)
	ENSCSEP00000023759	Ubiquitin-like domain-containing protein. (92 aa)
	UBB	Ubiquitin B. (744 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (151 aa)
	RAD23B	RAD23 homolog B, nucleotide excision repair protein. (382 aa)
	josd1	Josephin domain containing 1. (308 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000023759	ENSCSEP00000029254	ENSCSEP00000023759	ENSCSEP00000029254	Ubiquitin-like domain-containing protein.	Josephin domain containing 2.	0.726
ENSCSEP00000023759	LOC103377326	ENSCSEP00000023759	ENSCSEP00000001453	Ubiquitin-like domain-containing protein.	Ataxin 3.	0.755
ENSCSEP00000023759	LOC103393630	ENSCSEP00000023759	ENSCSEP00000022083	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.872
ENSCSEP00000023759	LOC103397105	ENSCSEP00000023759	ENSCSEP00000018351	Ubiquitin-like domain-containing protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.740
ENSCSEP00000023759	LOC103398200	ENSCSEP00000023759	ENSCSEP00000021019	Ubiquitin-like domain-containing protein.	Valosin containing protein; Belongs to the AAA ATPase family.	0.740
ENSCSEP00000023759	LOC103399826	ENSCSEP00000023759	ENSCSEP00000002970	Ubiquitin-like domain-containing protein.	RAD23 homolog A, nucleotide excision repair protein b.	0.872
ENSCSEP00000023759	RAD23B	ENSCSEP00000023759	ENSCSEP00000027373	Ubiquitin-like domain-containing protein.	RAD23 homolog B, nucleotide excision repair protein.	0.872
ENSCSEP00000023759	SPATA5	ENSCSEP00000023759	ENSCSEP00000006965	Ubiquitin-like domain-containing protein.	Spermatogenesis associated 5.	0.740
ENSCSEP00000023759	UBB	ENSCSEP00000023759	ENSCSEP00000025180	Ubiquitin-like domain-containing protein.	Ubiquitin B.	0.961
ENSCSEP00000023759	josd1	ENSCSEP00000023759	ENSCSEP00000031875	Ubiquitin-like domain-containing protein.	Josephin domain containing 1.	0.726
ENSCSEP00000023759	prkn	ENSCSEP00000023759	ENSCSEP00000006207	Ubiquitin-like domain-containing protein.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.934
ENSCSEP00000023759	rps27a	ENSCSEP00000023759	ENSCSEP00000002392	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.990
ENSCSEP00000023759	spata5l1	ENSCSEP00000023759	ENSCSEP00000019910	Ubiquitin-like domain-containing protein.	Spermatogenesis associated 5-like 1.	0.740
ENSCSEP00000029254	ENSCSEP00000023759	ENSCSEP00000029254	ENSCSEP00000023759	Josephin domain containing 2.	Ubiquitin-like domain-containing protein.	0.726
ENSCSEP00000029254	LOC103377326	ENSCSEP00000029254	ENSCSEP00000001453	Josephin domain containing 2.	Ataxin 3.	0.557
ENSCSEP00000029254	LOC103393630	ENSCSEP00000029254	ENSCSEP00000022083	Josephin domain containing 2.	Ubiquitin-like domain-containing protein.	0.538
ENSCSEP00000029254	LOC103399826	ENSCSEP00000029254	ENSCSEP00000002970	Josephin domain containing 2.	RAD23 homolog A, nucleotide excision repair protein b.	0.538
ENSCSEP00000029254	RAD23B	ENSCSEP00000029254	ENSCSEP00000027373	Josephin domain containing 2.	RAD23 homolog B, nucleotide excision repair protein.	0.538
ENSCSEP00000029254	UBB	ENSCSEP00000029254	ENSCSEP00000025180	Josephin domain containing 2.	Ubiquitin B.	0.592
ENSCSEP00000029254	rps27a	ENSCSEP00000029254	ENSCSEP00000002392	Josephin domain containing 2.	Ribosomal protein S27a.	0.820