STRINGSTRING
rps27a rps27a LOC103378632 LOC103378632 ENSCSEP00000023855 ENSCSEP00000023855 ENSCSEP00000024413 ENSCSEP00000024413 rpap3 rpap3 ENSCSEP00000024490 ENSCSEP00000024490 UBB UBB uba52 uba52 RAD23B RAD23B actb actb LOC103399026 LOC103399026 ino80 ino80 ino80e ino80e actr5 actr5 cops7a cops7a cops3 cops3 gps1 gps1 parp1 parp1 parp2 parp2 LOC103376874 LOC103376874 LOC103399826 LOC103399826 YY1 YY1 Cul4b Cul4b LOC103383494 LOC103383494 Parp3 Parp3 LOC103383536 LOC103383536 ino80d ino80d ruvbl1 ruvbl1 COPS6 COPS6 tfpt tfpt ino80b ino80b mcrs1 mcrs1 LOC103390697 LOC103390697 ENSCSEP00000008320 ENSCSEP00000008320 actr8 actr8 xpc xpc kxd1 kxd1 rbx1 rbx1 cetn3 cetn3 ddb2 ddb2 ino80c ino80c nfrkb nfrkb ENSCSEP00000015249 ENSCSEP00000015249 cops4 cops4 Wdr76 Wdr76 ddb1 ddb1 cops2 cops2 LOC103393630 LOC103393630 cops5 cops5 ENSCSEP00000023759 ENSCSEP00000023759
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rps27aRibosomal protein S27a. (156 aa)
LOC103378632Cullin 4A; Belongs to the cullin family. (759 aa)
ENSCSEP00000023855COP9 signalosome subunit 8. (191 aa)
ENSCSEP00000024413Von Willebrand factor A domain containing 5B2. (1111 aa)
rpap3RNA polymerase II associated protein 3. (650 aa)
ENSCSEP00000024490TPR_REGION domain-containing protein. (128 aa)
UBBUbiquitin B. (744 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (151 aa)
RAD23BRAD23 homolog B, nucleotide excision repair protein. (382 aa)
actbPutative beta-actin. (375 aa)
LOC103399026Uncharacterized protein. (52 aa)
ino80INO80 complex ATPase subunit. (1453 aa)
ino80eINO80 complex subunit E. (231 aa)
actr5Actin related protein 5; Belongs to the actin family. (635 aa)
cops7aCOP9 constitutive photomorphogenic homolog subunit 7A. (268 aa)
cops3COP9 signalosome subunit 3. (423 aa)
gps1G protein pathway suppressor 1. (483 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1015 aa)
parp2Poly [ADP-ribose] polymerase. (653 aa)
LOC103376874Uncharacterized protein. (350 aa)
LOC103399826RAD23 homolog A, nucleotide excision repair protein b. (386 aa)
YY1YY1 transcription factor b. (361 aa)
Cul4bCullin 4B; Belongs to the cullin family. (825 aa)
LOC103383494Uncharacterized protein. (375 aa)
Parp3Poly [ADP-ribose] polymerase. (514 aa)
LOC103383536Uncharacterized protein. (539 aa)
ino80dINO80 complex subunit Da. (974 aa)
ruvbl1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
COPS6COP9 signalosome subunit 6. (323 aa)
tfptTCF3 (E2A) fusion partner. (199 aa)
ino80bINO80 complex subunit B. (337 aa)
mcrs1Microspherule protein 1. (479 aa)
LOC103390697Centrin 4. (217 aa)
ENSCSEP00000008320Si:ch73-290k24.6. (224 aa)
actr8Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (638 aa)
xpcXeroderma pigmentosum, complementation group C. (924 aa)
kxd1KxDL motif containing 1. (180 aa)
rbx1Ring-box 1, E3 ubiquitin protein ligase. (108 aa)
cetn3Uncharacterized protein. (170 aa)
ddb2Damage-specific DNA binding protein 2. (499 aa)
ino80cINO80 complex subunit C. (201 aa)
nfrkbNuclear factor related to kappaB binding protein. (1221 aa)
ENSCSEP00000015249Uncharacterized protein. (146 aa)
cops4COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (489 aa)
Wdr76WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family. (546 aa)
ddb1Damage-specific DNA binding protein 1. (1137 aa)
cops2COP9 signalosome subunit 2. (452 aa)
LOC103393630Ubiquitin-like domain-containing protein. (179 aa)
cops5COP9 signalosome subunit 5. (339 aa)
ENSCSEP00000023759Ubiquitin-like domain-containing protein. (92 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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