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Cul4b Cul4b polr2l polr2l polr2c polr2c rps27a rps27a mnat1 mnat1 LOC103378632 LOC103378632 nrde2 nrde2 ppie ppie cops3 cops3 polr2j polr2j LOC103386836 LOC103386836 usp7 usp7 uvssa uvssa EP300 EP300 gps1 gps1 gtf2h4 gtf2h4 cops7a cops7a polr2k polr2k ercc8 ercc8 ercc3 ercc3 cdk7 cdk7 uba52 uba52 UBB UBB tceanc2 tceanc2 LOC103397561 LOC103397561 polr2h polr2h ENSCSEP00000023855 ENSCSEP00000023855 ENSCSEP00000023759 ENSCSEP00000023759 gtf2h3 gtf2h3 ppp1r42 ppp1r42 cops5 cops5 tcea1 tcea1 LOC103394810 LOC103394810 xpa xpa cops2 cops2 ddb1 ddb1 polr2g polr2g xab2 xab2 cops4 cops4 ZNF830 ZNF830 prpf19 prpf19 LOC103385145 LOC103385145 ercc6 ercc6 POLR2E POLR2E polr2f polr2f rbx1 rbx1 ENSCSEP00000010137 ENSCSEP00000010137 gtf2h1 gtf2h1 polr2d polr2d kxd1 kxd1 ercc2 ercc2 polr2b polr2b tcea3 tcea3 TCEANC TCEANC aqr aqr COPS6 COPS6 polr2a polr2a polr2i polr2i
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cul4bCullin 4B; Belongs to the cullin family. (825 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
rps27aRibosomal protein S27a. (156 aa)
mnat1MNAT1 component of CDK activating kinase. (311 aa)
LOC103378632Cullin 4A; Belongs to the cullin family. (759 aa)
nrde2NRDE-2, necessary for RNA interference, domain containing. (1106 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (304 aa)
cops3COP9 signalosome subunit 3. (423 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
LOC103386836ISY1 splicing factor homolog. (323 aa)
usp7Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1117 aa)
uvssaUV-stimulated scaffold protein A. (760 aa)
EP300E1A binding protein p300. (2880 aa)
gps1G protein pathway suppressor 1. (483 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (461 aa)
cops7aCOP9 constitutive photomorphogenic homolog subunit 7A. (268 aa)
polr2kPolymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
ercc8Excision repair cross-complementation group 8. (429 aa)
ercc3Excision repair cross-complementation group 3. (785 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (344 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (151 aa)
UBBUbiquitin B. (744 aa)
tceanc2TFIIS N-terminal domain-containing protein. (298 aa)
LOC103397561General transcription factor IIH subunit. (414 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (155 aa)
ENSCSEP00000023855COP9 signalosome subunit 8. (191 aa)
ENSCSEP00000023759Ubiquitin-like domain-containing protein. (92 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (327 aa)
ppp1r42Protein phosphatase 1, regulatory subunit 42. (309 aa)
cops5COP9 signalosome subunit 5. (339 aa)
tcea1Transcription elongation factor A (SII), 1. (327 aa)
LOC103394810Si:ch73-1a9.3. (82 aa)
xpaXeroderma pigmentosum, complementation group A. (270 aa)
cops2COP9 signalosome subunit 2. (452 aa)
ddb1Damage-specific DNA binding protein 1. (1137 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (190 aa)
xab2XPA binding protein 2. (851 aa)
cops4COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (489 aa)
ZNF830Zinc finger protein 830. (347 aa)
prpf19Pre-mRNA processing factor 19. (504 aa)
LOC103385145Transcription elongation factor A (SII), 2. (297 aa)
ercc6Excision repair cross-complementation group 6. (1444 aa)
POLR2ERNA polymerase II subunit E. (229 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
rbx1Ring-box 1, E3 ubiquitin protein ligase. (108 aa)
ENSCSEP00000010137E1A binding protein p300 b. (2546 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (551 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (144 aa)
kxd1KxDL motif containing 1. (180 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
tcea3Transcription elongation factor A (SII), 3. (606 aa)
TCEANCTranscription elongation factor A N-terminal and central domain containing. (293 aa)
aqrAquarius intron-binding spliceosomal factor. (1377 aa)
COPS6COP9 signalosome subunit 6. (323 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1965 aa)
polr2iPolymerase (RNA) II (DNA directed) polypeptide I. (287 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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