STRINGSTRING
Faap100 Faap100 fanca fanca ENSCSEP00000033914 ENSCSEP00000033914 faap24 faap24 ercc4 ercc4 ENSCSEP00000030121 ENSCSEP00000030121 rpa2 rpa2 usp1 usp1 uba52 uba52 UBB UBB ENSCSEP00000023759 ENSCSEP00000023759 fanci fanci LOC103391605 LOC103391605 nutf2 nutf2 fancg fancg rpa1 rpa1 LOC103395242 LOC103395242 fan1 fan1 ENSCSEP00000018388 ENSCSEP00000018388 fancc fancc ENSCSEP00000017601 ENSCSEP00000017601 ercc1 ercc1 atrip atrip fancb fancb proser1 proser1 wdr48 wdr48 ENSCSEP00000009964 ENSCSEP00000009964 fancf fancf kxd1 kxd1 ENSCSEP00000006735 ENSCSEP00000006735 atr atr eme1 eme1 ENSCSEP00000004295 ENSCSEP00000004295 fancm fancm fancl fancl dclre1b dclre1b rps27a rps27a meiob meiob mus81 mus81
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Faap100Uncharacterized protein. (500 aa)
fancaUncharacterized protein. (938 aa)
ENSCSEP00000033914Uncharacterized protein. (93 aa)
faap24FA core complex associated protein 24. (213 aa)
ercc4Excision repair cross-complementation group 4. (899 aa)
ENSCSEP00000030121Uncharacterized protein. (99 aa)
rpa2Replication protein A2. (274 aa)
usp1Ubiquitin carboxyl-terminal hydrolase. (798 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (151 aa)
UBBUbiquitin B. (744 aa)
ENSCSEP00000023759Ubiquitin-like domain-containing protein. (92 aa)
fanciFA complementation group I. (1269 aa)
LOC103391605Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (281 aa)
nutf2Nuclear transport factor 2. (126 aa)
fancgUncharacterized protein. (643 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
LOC103395242Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (633 aa)
fan1Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (995 aa)
ENSCSEP00000018388Uncharacterized protein. (232 aa)
fanccFA complementation group C. (602 aa)
ENSCSEP00000017601Centromere protein X. (88 aa)
ercc1Excision repair cross-complementation group 1. (359 aa)
atripUncharacterized protein. (600 aa)
fancbFA complementation group B. (838 aa)
proser1Proline and serine rich 1. (796 aa)
wdr48WD repeat domain 48b. (643 aa)
ENSCSEP00000009964Uncharacterized protein. (85 aa)
fancfFA complementation group F. (345 aa)
kxd1KxDL motif containing 1. (180 aa)
ENSCSEP00000006735Polymerase (DNA directed) nu. (772 aa)
atrATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2429 aa)
eme1Essential meiotic structure-specific endonuclease 1. (532 aa)
ENSCSEP00000004295FA complementation group D2. (1116 aa)
fancmUncharacterized protein. (2039 aa)
fanclFA complementation group L. (370 aa)
dclre1bDNA cross-link repair 1B. (609 aa)
rps27aRibosomal protein S27a. (156 aa)
meiobMethionine sulfoxide reductase B1b. (436 aa)
mus81MUS81 structure-specific endonuclease subunit. (596 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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