34 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tbpl1	TBP-like 1. (194 aa)
	polr2h	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (155 aa)
	polr3g	Polymerase (RNA) III (DNA directed) polypeptide G. (189 aa)
	LOC103381840	Zgc:171971. (358 aa)
	LOC103393113	Si:dkey-208k4.2. (368 aa)
	polr3a	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1390 aa)
	polr2k	Polymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
	Polr1c	RNA polymerase I and III subunit C. (346 aa)
	crcp	Calcitonin gene-related peptide-receptor component protein. (148 aa)
	tbp	TATA box binding protein. (355 aa)
	ENSCSEP00000001650	Uncharacterized protein. (183 aa)
	polr3f	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (316 aa)
	gtf3c4	General transcription factor IIIC, polypeptide 4. (799 aa)
	gtf3c5	General transcription factor IIIC, polypeptide 5. (528 aa)
	polr2l	Polymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
	GTF3C1	General transcription factor IIIC subunit 1. (2210 aa)
	polr3c	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (544 aa)
	gtf3c3	General transcription factor IIIC, polypeptide 3. (935 aa)
	gtf3c6	TFIIIC_sub6 domain-containing protein. (215 aa)
	ENSCSEP00000006960	WD_REPEATS_REGION domain-containing protein. (644 aa)
	polr3b	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1136 aa)
	ENSCSEP00000009353	TFIIB-type domain-containing protein. (156 aa)
	polr3h	Polymerase (RNA) III (DNA directed) polypeptide H. (212 aa)
	polr2f	Polymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
	POLR2E	RNA polymerase II subunit E. (229 aa)
	polr3d	Polymerase (RNA) III (DNA directed) polypeptide D. (386 aa)
	polr3k	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
	LOC103381809	TATA box binding protein like 2. (450 aa)
	ENSCSEP00000019811	Uncharacterized protein. (185 aa)
	polr3e	Polymerase (RNA) III (DNA directed) polypeptide E. (676 aa)
	brf1	BRF1 RNA polymerase III transcription initiation factor subunit a. (686 aa)
	bdp1	SANT domain-containing protein. (2381 aa)
	Polr3gl	Uncharacterized protein. (191 aa)
	GTF3A	General transcription factor IIIA. (351 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000001650	ENSCSEP00000009353	ENSCSEP00000001650	ENSCSEP00000009353	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.747
ENSCSEP00000001650	GTF3C1	ENSCSEP00000001650	ENSCSEP00000003078	Uncharacterized protein.	General transcription factor IIIC subunit 1.	0.527
ENSCSEP00000001650	LOC103381840	ENSCSEP00000001650	ENSCSEP00000024299	Uncharacterized protein.	Zgc:171971.	0.739
ENSCSEP00000001650	POLR2E	ENSCSEP00000001650	ENSCSEP00000011072	Uncharacterized protein.	RNA polymerase II subunit E.	0.896
ENSCSEP00000001650	Polr1c	ENSCSEP00000001650	ENSCSEP00000028317	Uncharacterized protein.	RNA polymerase I and III subunit C.	0.826
ENSCSEP00000001650	Polr3gl	ENSCSEP00000001650	ENSCSEP00000031830	Uncharacterized protein.	Uncharacterized protein.	0.716
ENSCSEP00000001650	bdp1	ENSCSEP00000001650	ENSCSEP00000021348	Uncharacterized protein.	SANT domain-containing protein.	0.910
ENSCSEP00000001650	brf1	ENSCSEP00000001650	ENSCSEP00000020473	Uncharacterized protein.	BRF1 RNA polymerase III transcription initiation factor subunit a.	0.747
ENSCSEP00000001650	crcp	ENSCSEP00000001650	ENSCSEP00000029373	Uncharacterized protein.	Calcitonin gene-related peptide-receptor component protein.	0.757
ENSCSEP00000001650	gtf3c3	ENSCSEP00000001650	ENSCSEP00000006291	Uncharacterized protein.	General transcription factor IIIC, polypeptide 3.	0.699
ENSCSEP00000001650	gtf3c4	ENSCSEP00000001650	ENSCSEP00000001902	Uncharacterized protein.	General transcription factor IIIC, polypeptide 4.	0.469
ENSCSEP00000001650	gtf3c5	ENSCSEP00000001650	ENSCSEP00000001949	Uncharacterized protein.	General transcription factor IIIC, polypeptide 5.	0.664
ENSCSEP00000001650	polr2f	ENSCSEP00000001650	ENSCSEP00000010669	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.877
ENSCSEP00000001650	polr2h	ENSCSEP00000001650	ENSCSEP00000023951	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.866
ENSCSEP00000001650	polr2k	ENSCSEP00000001650	ENSCSEP00000027187	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide K.	0.862
ENSCSEP00000001650	polr2l	ENSCSEP00000001650	ENSCSEP00000002979	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide L.	0.877
ENSCSEP00000001650	polr3a	ENSCSEP00000001650	ENSCSEP00000026108	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.798
ENSCSEP00000001650	polr3b	ENSCSEP00000001650	ENSCSEP00000009251	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.793
ENSCSEP00000001650	polr3c	ENSCSEP00000001650	ENSCSEP00000003716	Uncharacterized protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.801
ENSCSEP00000001650	polr3d	ENSCSEP00000001650	ENSCSEP00000012563	Uncharacterized protein.	Polymerase (RNA) III (DNA directed) polypeptide D.	0.739