29 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EEF1AKMT3	EEF1A lysine methyltransferase 3. (223 aa)
	mettl21a	Methyltransferase like 21A. (218 aa)
	ENSCSEP00000009571	Si:ch73-244f7.3. (279 aa)
	LOC103378889	Zgc:92518. (222 aa)
	ENSCSEP00000012339	Tr-type G domain-containing protein. (73 aa)
	kin	Kin17 DNA and RNA binding protein. (365 aa)
	eef2	Eukaryotic translation elongation factor 2b. (846 aa)
	LOC103398200	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	LOC103397105	Uncharacterized protein; Belongs to the AAA ATPase family. (806 aa)
	mettl22	Methyltransferase like 22. (286 aa)
	mettl23	Methyltransferase like 23. (233 aa)
	eef1akmt1	EEF1A lysine methyltransferase 1; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-79'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM5 family. (217 aa)
	eef2kmt	Eukaryotic elongation factor 2 lysine methyltransferase. (392 aa)
	ENSCSEP00000012679	annotation not available (45 aa)
	LOC103393908	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (461 aa)
	LOC103393909	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (462 aa)
	LOC103393911	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (415 aa)
	ENSCSEP00000012364	Tr-type G domain-containing protein. (84 aa)
	LOC103377398	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (458 aa)
	LOC103393907	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (414 aa)
	eef1akmt2	EEF1A lysine methyltransferase 2; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-318'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family. (243 aa)
	etfbkmt	Electron transfer flavoprotein subunit beta lysine methyltransferase. (253 aa)
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
	prmt3	Protein arginine methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (550 aa)
	vcpkmt	Valosin containing protein lysine (K) methyltransferase. (242 aa)
	EEF1A1	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (462 aa)
	etfb	Electron transfer flavoprotein subunit beta. (254 aa)
	LOC103399931	Tr-type G domain-containing protein. (860 aa)
	CAMKMT	Calmodulin-lysine N-methyltransferase. (290 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAMKMT	eef1akmt1	ENSCSEP00000005850	ENSCSEP00000014005	Calmodulin-lysine N-methyltransferase.	EEF1A lysine methyltransferase 1; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-79'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM5 family.	0.537
CAMKMT	eef1akmt2	ENSCSEP00000005850	ENSCSEP00000023962	Calmodulin-lysine N-methyltransferase.	EEF1A lysine methyltransferase 2; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-318'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	0.483
CAMKMT	etfbkmt	ENSCSEP00000005850	ENSCSEP00000024480	Calmodulin-lysine N-methyltransferase.	Electron transfer flavoprotein subunit beta lysine methyltransferase.	0.559
CAMKMT	kin	ENSCSEP00000005850	ENSCSEP00000031412	Calmodulin-lysine N-methyltransferase.	Kin17 DNA and RNA binding protein.	0.574
CAMKMT	mettl21a	ENSCSEP00000005850	ENSCSEP00000009156	Calmodulin-lysine N-methyltransferase.	Methyltransferase like 21A.	0.546
CAMKMT	mettl22	ENSCSEP00000005850	ENSCSEP00000018081	Calmodulin-lysine N-methyltransferase.	Methyltransferase like 22.	0.714
CAMKMT	mettl23	ENSCSEP00000005850	ENSCSEP00000016684	Calmodulin-lysine N-methyltransferase.	Methyltransferase like 23.	0.441
CAMKMT	vcpkmt	ENSCSEP00000005850	ENSCSEP00000000351	Calmodulin-lysine N-methyltransferase.	Valosin containing protein lysine (K) methyltransferase.	0.448
EEF1A1	LOC103399931	ENSCSEP00000000767	ENSCSEP00000004357	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	Tr-type G domain-containing protein.	0.711
EEF1A1	eef1akmt1	ENSCSEP00000000767	ENSCSEP00000014005	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	EEF1A lysine methyltransferase 1; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-79'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM5 family.	0.670
EEF1A1	eef1akmt2	ENSCSEP00000000767	ENSCSEP00000023962	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	EEF1A lysine methyltransferase 2; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-318'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	0.567
EEF1A1	eef2	ENSCSEP00000000767	ENSCSEP00000022139	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	Eukaryotic translation elongation factor 2b.	0.669
EEF1A1	rps2	ENSCSEP00000000767	ENSCSEP00000024564	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.814
EEF1AKMT3	LOC103397105	ENSCSEP00000006109	ENSCSEP00000018351	EEF1A lysine methyltransferase 3.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.535
EEF1AKMT3	LOC103398200	ENSCSEP00000006109	ENSCSEP00000021019	EEF1A lysine methyltransferase 3.	Valosin containing protein; Belongs to the AAA ATPase family.	0.535
EEF1AKMT3	etfb	ENSCSEP00000006109	ENSCSEP00000001089	EEF1A lysine methyltransferase 3.	Electron transfer flavoprotein subunit beta.	0.547
ENSCSEP00000009571	LOC103397105	ENSCSEP00000009571	ENSCSEP00000018351	Si:ch73-244f7.3.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.534
ENSCSEP00000009571	LOC103398200	ENSCSEP00000009571	ENSCSEP00000021019	Si:ch73-244f7.3.	Valosin containing protein; Belongs to the AAA ATPase family.	0.534
ENSCSEP00000009571	eef2kmt	ENSCSEP00000009571	ENSCSEP00000013822	Si:ch73-244f7.3.	Eukaryotic elongation factor 2 lysine methyltransferase.	0.573
ENSCSEP00000009571	etfb	ENSCSEP00000009571	ENSCSEP00000001089	Si:ch73-244f7.3.	Electron transfer flavoprotein subunit beta.	0.596