STRINGSTRING
rps27a rps27a LOC103399968 LOC103399968 LOC103383633 LOC103383633 MARCHF9 MARCHF9 LOC103391830 LOC103391830 uggt1 uggt1 kxd1 kxd1 marchf8 marchf8 LOC103376759 LOC103376759 LOC103396854 LOC103396854 LOC103379226 LOC103379226 man1b1 man1b1 LOC103385197 LOC103385197 marchf4 marchf4 MARCHF6 MARCHF6 ENSCSEP00000017874 ENSCSEP00000017874 MARCHF2 MARCHF2 ENSCSEP00000023759 ENSCSEP00000023759 LOC103389019 LOC103389019 UBB UBB edem1 edem1 LOC103396665 LOC103396665 rnf103 rnf103 LOC103384448 LOC103384448 rnf139 rnf139 uba52 uba52 LOC103389212 LOC103389212 marchf7 marchf7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rps27aRibosomal protein S27a. (156 aa)
LOC103399968alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (846 aa)
LOC103383633Membrane-associated ring finger (C3HC4) 1. (527 aa)
MARCHF9Membrane associated ring-CH-type finger 9. (342 aa)
LOC103391830UDP-glucose glycoprotein glucosyltransferase 2. (1482 aa)
uggt1UDP-glucose glycoprotein glucosyltransferase 1. (1540 aa)
kxd1KxDL motif containing 1. (180 aa)
marchf8Uncharacterized protein. (344 aa)
LOC103376759Membrane-associated ring finger (C3HC4) 2. (257 aa)
LOC103396854Membrane-associated ring finger (C3HC4) 11. (351 aa)
LOC103379226RING-CH-type domain-containing protein. (246 aa)
man1b1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (625 aa)
LOC103385197Membrane-associated ring finger (C3HC4) 9. (347 aa)
marchf4Membrane-associated ring finger (C3HC4) 4. (404 aa)
MARCHF6Membrane associated ring-CH-type finger 6. (868 aa)
ENSCSEP00000017874RING-CH-type domain-containing protein. (248 aa)
MARCHF2Membrane associated ring-CH-type finger 2. (248 aa)
ENSCSEP00000023759Ubiquitin-like domain-containing protein. (92 aa)
LOC103389019alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (663 aa)
UBBUbiquitin B. (744 aa)
edem1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (635 aa)
LOC103396665RING-CH-type domain-containing protein. (904 aa)
rnf103Ring finger protein 103. (674 aa)
LOC103384448alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (569 aa)
rnf139Ring finger protein 139. (627 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (151 aa)
LOC103389212alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (873 aa)
marchf7Membrane-associated ring finger (C3HC4) 7. (775 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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