43 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RBBP6	RB binding protein 6, ubiquitin ligase. (1483 aa)
	LOC103396448	RALY RNA binding protein like. (289 aa)
	LOC103395949	Cold inducible RNA binding protein b. (224 aa)
	LOC103389006	CULLIN_2 domain-containing protein; Belongs to the cullin family. (761 aa)
	ENSCSEP00000024100	Cullin domain-containing protein; Belongs to the cullin family. (153 aa)
	ENSCSEP00000024828	DWNN domain-containing protein. (113 aa)
	ENSCSEP00000009123	Myosin VIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1229 aa)
	LOC103379185	Uncharacterized protein. (212 aa)
	ENSCSEP00000013162	CULLIN_2 domain-containing protein; Belongs to the cullin family. (743 aa)
	cpsf6	Cleavage and polyadenylation specific factor 6. (586 aa)
	LOC103390980	E3 ubiquitin protein ligase. (977 aa)
	cops4	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (489 aa)
	ENSCSEP00000017917	CULLIN_2 domain-containing protein; Belongs to the cullin family. (752 aa)
	ENSCSEP00000024860	Uncharacterized protein. (234 aa)
	txnl1	Thioredoxin-like 1. (301 aa)
	ENSCSEP00000025327	Rho-associated, coiled-coil containing protein kinase 2a; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1413 aa)
	cct7	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (540 aa)
	cct2	Chaperonin containing TCP1, subunit 2 (beta). (530 aa)
	Rbbp6	RING-type domain-containing protein. (1491 aa)
	ENSCSEP00000029215	DWNN domain-containing protein. (154 aa)
	cul3	Cullin 3; Belongs to the cullin family. (780 aa)
	ENSCSEP00000030285	Uncharacterized protein. (162 aa)
	ENSCSEP00000030290	RRM domain-containing protein. (104 aa)
	scaf4	SR-related CTD-associated factor 4a. (1132 aa)
	LOC103385815	RRM domain-containing protein. (293 aa)
	gps1	G protein pathway suppressor 1. (483 aa)
	hnrnpc	RRM domain-containing protein. (313 aa)
	LOC103378217	SR-related CTD associated factor 4. (751 aa)
	vim	Vimentin like; Belongs to the intermediate filament family. (456 aa)
	cops2	COP9 signalosome subunit 2. (452 aa)
	rock1	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1374 aa)
	scaf8	Uncharacterized protein. (1385 aa)
	srrm1	Serine/arginine repetitive matrix 1. (852 aa)
	ENSCSEP00000002954	Si:ch1073-335m2.2. (2623 aa)
	ENSCSEP00000002960	RRM domain-containing protein. (133 aa)
	LOC103377973	Myosin VIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1255 aa)
	LOC103378456	Transformer 2 beta homolog. (314 aa)
	spen	Spen family transcriptional repressor. (3539 aa)
	LOC103384878	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (470 aa)
	ENSCSEP00000007327	Phosphodiesterase. (845 aa)
	rbmx	RNA binding motif protein X-linked. (392 aa)
	tra2a	Transformer 2 alpha homolog. (301 aa)
	tra2b	Transformer 2 beta homolog. (268 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000002954	ENSCSEP00000002960	ENSCSEP00000002954	ENSCSEP00000002960	Si:ch1073-335m2.2.	RRM domain-containing protein.	0.899
ENSCSEP00000002960	ENSCSEP00000002954	ENSCSEP00000002960	ENSCSEP00000002954	RRM domain-containing protein.	Si:ch1073-335m2.2.	0.899
ENSCSEP00000013162	cct2	ENSCSEP00000013162	ENSCSEP00000028886	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Chaperonin containing TCP1, subunit 2 (beta).	0.454
ENSCSEP00000013162	cct7	ENSCSEP00000013162	ENSCSEP00000026133	CULLIN_2 domain-containing protein; Belongs to the cullin family.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.495
ENSCSEP00000013162	cops2	ENSCSEP00000013162	ENSCSEP00000019990	CULLIN_2 domain-containing protein; Belongs to the cullin family.	COP9 signalosome subunit 2.	0.784
ENSCSEP00000013162	cops4	ENSCSEP00000013162	ENSCSEP00000017286	CULLIN_2 domain-containing protein; Belongs to the cullin family.	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).	0.770
ENSCSEP00000013162	gps1	ENSCSEP00000013162	ENSCSEP00000032049	CULLIN_2 domain-containing protein; Belongs to the cullin family.	G protein pathway suppressor 1.	0.794
ENSCSEP00000017917	cct2	ENSCSEP00000017917	ENSCSEP00000028886	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Chaperonin containing TCP1, subunit 2 (beta).	0.454
ENSCSEP00000017917	cct7	ENSCSEP00000017917	ENSCSEP00000026133	CULLIN_2 domain-containing protein; Belongs to the cullin family.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.495
ENSCSEP00000017917	cops2	ENSCSEP00000017917	ENSCSEP00000019990	CULLIN_2 domain-containing protein; Belongs to the cullin family.	COP9 signalosome subunit 2.	0.784
ENSCSEP00000017917	cops4	ENSCSEP00000017917	ENSCSEP00000017286	CULLIN_2 domain-containing protein; Belongs to the cullin family.	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).	0.770
ENSCSEP00000017917	gps1	ENSCSEP00000017917	ENSCSEP00000032049	CULLIN_2 domain-containing protein; Belongs to the cullin family.	G protein pathway suppressor 1.	0.794
ENSCSEP00000024100	cct2	ENSCSEP00000024100	ENSCSEP00000028886	Cullin domain-containing protein; Belongs to the cullin family.	Chaperonin containing TCP1, subunit 2 (beta).	0.454
ENSCSEP00000024100	cct7	ENSCSEP00000024100	ENSCSEP00000026133	Cullin domain-containing protein; Belongs to the cullin family.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.495
ENSCSEP00000024100	cops2	ENSCSEP00000024100	ENSCSEP00000019990	Cullin domain-containing protein; Belongs to the cullin family.	COP9 signalosome subunit 2.	0.784
ENSCSEP00000024100	cops4	ENSCSEP00000024100	ENSCSEP00000017286	Cullin domain-containing protein; Belongs to the cullin family.	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).	0.770
ENSCSEP00000024100	gps1	ENSCSEP00000024100	ENSCSEP00000032049	Cullin domain-containing protein; Belongs to the cullin family.	G protein pathway suppressor 1.	0.794
ENSCSEP00000025327	rock1	ENSCSEP00000025327	ENSCSEP00000019755	Rho-associated, coiled-coil containing protein kinase 2a; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.	0.907
ENSCSEP00000030285	LOC103385815	ENSCSEP00000030285	ENSCSEP00000030883	Uncharacterized protein.	RRM domain-containing protein.	0.425
ENSCSEP00000030285	hnrnpc	ENSCSEP00000030285	ENSCSEP00000033262	Uncharacterized protein.	RRM domain-containing protein.	0.425