45 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mvb12a	Uncharacterized protein. (285 aa)
	mvb12b	Multivesicular body subunit 12Ba. (279 aa)
	ubap1l	Uncharacterized protein. (396 aa)
	ubap1	Ubiquitin associated protein 1. (447 aa)
	hras-2	Zgc:123278. (192 aa)
	zfyve19	Zinc finger, FYVE domain containing 19. (465 aa)
	LOC103377456	Charged multivesicular body protein 5b. (218 aa)
	LOC103377473	Charged multivesicular body protein 4C. (229 aa)
	ZFYVE1	Zinc finger FYVE-type containing 1. (789 aa)
	chmp3	Charged multivesicular body protein 3. (220 aa)
	chmp6	Charged multivesicular body protein 6. (202 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	stam2	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2. (521 aa)
	LOC103376678	Uncharacterized protein; Belongs to the AAA ATPase family. (418 aa)
	vta1	Vesicle (multivesicular body) trafficking 1. (317 aa)
	kxd1	KxDL motif containing 1. (180 aa)
	UBB	Ubiquitin B. (744 aa)
	LOC103384300	VPS37C subunit of ESCRT-I. (355 aa)
	ENSCSEP00000023759	Ubiquitin-like domain-containing protein. (92 aa)
	LOC103395348	Si:ch211-284f22.3. (306 aa)
	snf8	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (257 aa)
	chmp2a	Charged multivesicular body protein 2A. (220 aa)
	stam	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1. (443 aa)
	vps37b	Zgc:114173. (283 aa)
	LOC103396414	Charged multivesicular body protein 5a. (295 aa)
	chmp2b	Charged multivesicular body protein 2Bb. (214 aa)
	c17h17orf75	Zgc:153240. (361 aa)
	vps4a	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (445 aa)
	LOC103386781	Uncharacterized protein. (218 aa)
	chmp4b	Charged multivesicular body protein 4Bb. (221 aa)
	LOC103380759	Zinc finger, FYVE domain containing 1. (780 aa)
	ENSCSEP00000028622	MABP domain-containing protein. (241 aa)
	chmp7	Charged multivesicular body protein 7. (441 aa)
	ENSCSEP00000028340	Si:dkey-185p13.1. (73 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (436 aa)
	vps37a	VPS37A subunit of ESCRT-I. (378 aa)
	vps28	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (223 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (151 aa)
	LOC103392792	Charged multivesicular body protein 6a. (203 aa)
	tm9sf1	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (609 aa)
	vps36	Vacuolar protein sorting 36 homolog. (398 aa)
	hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate. (803 aa)
	VPS37B	VPS37B subunit of ESCRT-I. (283 aa)
	vps25	Vacuolar protein sorting 25 homolog. (174 aa)
	tsg101	Tumor susceptibility 101a. (390 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000023759	LOC103380759	ENSCSEP00000023759	ENSCSEP00000030192	Ubiquitin-like domain-containing protein.	Zinc finger, FYVE domain containing 1.	0.671
ENSCSEP00000023759	UBB	ENSCSEP00000023759	ENSCSEP00000025180	Ubiquitin-like domain-containing protein.	Ubiquitin B.	0.961
ENSCSEP00000023759	ZFYVE1	ENSCSEP00000023759	ENSCSEP00000001344	Ubiquitin-like domain-containing protein.	Zinc finger FYVE-type containing 1.	0.671
ENSCSEP00000023759	chmp2a	ENSCSEP00000023759	ENSCSEP00000022888	Ubiquitin-like domain-containing protein.	Charged multivesicular body protein 2A.	0.639
ENSCSEP00000023759	hgs	ENSCSEP00000023759	ENSCSEP00000013607	Ubiquitin-like domain-containing protein.	Hepatocyte growth factor-regulated tyrosine kinase substrate.	0.802
ENSCSEP00000023759	hras-2	ENSCSEP00000023759	ENSCSEP00000012292	Ubiquitin-like domain-containing protein.	Zgc:123278.	0.867
ENSCSEP00000023759	rps27a	ENSCSEP00000023759	ENSCSEP00000002392	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.990
ENSCSEP00000023759	stam	ENSCSEP00000023759	ENSCSEP00000022010	Ubiquitin-like domain-containing protein.	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.	0.847
ENSCSEP00000023759	stam2	ENSCSEP00000023759	ENSCSEP00000005360	Ubiquitin-like domain-containing protein.	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.	0.843
ENSCSEP00000023759	tsg101	ENSCSEP00000023759	ENSCSEP00000012315	Ubiquitin-like domain-containing protein.	Tumor susceptibility 101a.	0.867
ENSCSEP00000023759	vps28	ENSCSEP00000023759	ENSCSEP00000028167	Ubiquitin-like domain-containing protein.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.631
ENSCSEP00000023759	vps36	ENSCSEP00000023759	ENSCSEP00000014306	Ubiquitin-like domain-containing protein.	Vacuolar protein sorting 36 homolog.	0.922
ENSCSEP00000023759	zfyve19	ENSCSEP00000023759	ENSCSEP00000000243	Ubiquitin-like domain-containing protein.	Zinc finger, FYVE domain containing 19.	0.671
ENSCSEP00000028340	LOC103377456	ENSCSEP00000028340	ENSCSEP00000000346	Si:dkey-185p13.1.	Charged multivesicular body protein 5b.	0.730
ENSCSEP00000028340	LOC103377473	ENSCSEP00000028340	ENSCSEP00000000743	Si:dkey-185p13.1.	Charged multivesicular body protein 4C.	0.804
ENSCSEP00000028340	LOC103386781	ENSCSEP00000028340	ENSCSEP00000031516	Si:dkey-185p13.1.	Uncharacterized protein.	0.796
ENSCSEP00000028340	LOC103392792	ENSCSEP00000028340	ENSCSEP00000017330	Si:dkey-185p13.1.	Charged multivesicular body protein 6a.	0.855
ENSCSEP00000028340	LOC103396414	ENSCSEP00000028340	ENSCSEP00000021140	Si:dkey-185p13.1.	Charged multivesicular body protein 5a.	0.730
ENSCSEP00000028340	UBB	ENSCSEP00000028340	ENSCSEP00000025180	Si:dkey-185p13.1.	Ubiquitin B.	0.439
ENSCSEP00000028340	c17h17orf75	ENSCSEP00000028340	ENSCSEP00000020014	Si:dkey-185p13.1.	Zgc:153240.	0.799