STRINGSTRING
LOC103388963 LOC103388963 RPS17 RPS17 pih1d3 pih1d3 rps8 rps8 LOC103385488 LOC103385488 rps11 rps11 eif4a3 eif4a3 rpl32 rpl32 rpl27 rpl27 rps14 rps14 LOC103392522 LOC103392522 rpl17 rpl17 pnrc2 pnrc2 LOC103397662 LOC103397662 LOC103391406 LOC103391406 LOC103391408 LOC103391408 LOC103397023 LOC103397023 ENSCSEP00000030865 ENSCSEP00000030865 smg8 smg8 GSPT1 GSPT1 rpl36 rpl36 ncbp2 ncbp2 rps9 rps9 LOC103397614 LOC103397614 rps23 rps23 rpl7l1 rpl7l1 rps18 rps18 LOC103386647 LOC103386647 LOC103378498 LOC103378498 rsrc1 rsrc1 rpl5 rpl5 rpl30 rpl30 LOC103398864 LOC103398864 rps10 rps10 LOC103397702 LOC103397702 rpl21 rpl21 UPF1 UPF1 rpl22l1 rpl22l1 rnps1 rnps1 LOC103386546 LOC103386546 RPL3L RPL3L rps2 rps2 LOC103394269 LOC103394269 LOC103393683 LOC103393683 RPL7A RPL7A LOC103396020 LOC103396020 rps3 rps3 smg5 smg5 rps12 rps12 rpl23 rpl23 rpl38 rpl38 ENSCSEP00000021343 ENSCSEP00000021343 pabpc1 pabpc1 RPS20 RPS20 rplp1 rplp1 smg6 smg6 LOC103394163 LOC103394163 NCBP1 NCBP1 ENSCSEP00000019116 ENSCSEP00000019116 rbm8a rbm8a rps28 rps28 rps15 rps15 rps15a rps15a smg1 smg1 rps5 rps5 LOC103397057 LOC103397057 rpl14 rpl14 rpl15 rpl15 rpl29 rpl29 rpl31 rpl31 rpl23a rpl23a casc3 casc3 rpl7 rpl7 arl6ip1 arl6ip1 RPL19-2 RPL19-2 LOC103397472 LOC103397472 rsad1 rsad1 rpl37a rpl37a LOC103398432 LOC103398432 rps21 rps21 rpl13 rpl13 ENSCSEP00000012396 ENSCSEP00000012396 rpl11 rpl11 ENSCSEP00000012299 ENSCSEP00000012299 ENSCSEP00000012296 ENSCSEP00000012296 LOC103394567 LOC103394567 RPL19 RPL19 Smg7 Smg7 ENSCSEP00000011098 ENSCSEP00000011098 rpl34 rpl34 LOC103380240 LOC103380240 LOC103399204 LOC103399204 LOC103399068 LOC103399068 etf1 etf1 rnpepl1 rnpepl1 rpl35a rpl35a kxd1 kxd1 rpl12 rpl12 rplp0 rplp0 rps7 rps7 smg9 smg9 ENSCSEP00000008401 ENSCSEP00000008401 rpl8 rpl8 upf3a upf3a ENSCSEP00000007657 ENSCSEP00000007657 rps24 rps24 rpl9 rpl9 LOC103381298 LOC103381298 LOC103384861 LOC103384861 LOC103382554 LOC103382554 LOC103382555 LOC103382555 rps6 rps6 rpl24 rpl24 rpl18a rpl18a rps26 rps26 UPF2 UPF2 ENSCSEP00000005425 ENSCSEP00000005425 rpl10 rpl10 rps3a rps3a LOC103390585 LOC103390585 LOC103378172 LOC103378172 LOC103379975 LOC103379975 RPS27 RPS27 rps25 rps25 upf3b upf3b Rpl39 Rpl39 Rps29 Rps29 rps27a rps27a LOC103378706 LOC103378706 rpl28 rpl28 rpl37 rpl37 ENSCSEP00000001847 ENSCSEP00000001847 RPL27A RPL27A ENSCSEP00000001637 ENSCSEP00000001637 rps13 rps13 magoh magoh rps4x rps4x ENSCSEP00000000582 ENSCSEP00000000582 LOC103382382 LOC103382382 pabpc4 pabpc4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103388963Ribosomal protein S19. (138 aa)
RPS17Ribosomal protein S17. (121 aa)
pih1d3PIH1 domain containing 3. (143 aa)
rps840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (210 aa)
LOC103385488Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (554 aa)
rps11Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (169 aa)
eif4a3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (406 aa)
rpl32Ribosomal protein L32. (134 aa)
rpl2760S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (80 aa)
rps14Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
LOC103392522Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (432 aa)
rpl17Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (215 aa)
pnrc2Proline-rich nuclear receptor coactivator 2. (157 aa)
LOC103397662Ribosomal_L18_c domain-containing protein. (297 aa)
LOC103391406Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (446 aa)
LOC103391408Ribosomal protein L26. (145 aa)
LOC103397023Uncharacterized protein. (107 aa)
ENSCSEP00000030865Ribosomal protein L6. (320 aa)
smg8SMG8 nonsense mediated mRNA decay factor. (963 aa)
GSPT1G1 to S phase transition 1. (584 aa)
rpl3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (105 aa)
ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (189 aa)
rps9Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
LOC103397614NAD(P)-bd_dom domain-containing protein. (219 aa)
rps23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
rpl7l1Ribosomal protein L7-like 1. (262 aa)
rps18Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (154 aa)
LOC103386647Ribosomal protein L22. (153 aa)
LOC103378498Protein phosphatase 2, regulatory subunit A, beta b. (589 aa)
rsrc1Uncharacterized protein. (325 aa)
rpl5Ribosomal protein L5. (298 aa)
rpl30Ribosomal protein L30. (116 aa)
LOC103398864Uncharacterized protein. (1075 aa)
rps10Ribosomal protein S10. (155 aa)
LOC103397702Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (448 aa)
rpl21Ribosomal protein L21. (143 aa)
UPF1UPF1 RNA helicase and ATPase. (1098 aa)
rpl22l1Ribosomal protein L22-like 1. (148 aa)
rnps1RNA binding protein S1, serine-rich domain. (286 aa)
LOC103386546Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (107 aa)
RPL3LRibosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family. (395 aa)
rps2Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
LOC103394269Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (633 aa)
LOC10339368340S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (314 aa)
RPL7ARibosomal protein L7a. (277 aa)
LOC103396020Uncharacterized protein. (1261 aa)
rps3Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (245 aa)
smg5SMG5 nonsense mediated mRNA decay factor. (1120 aa)
rps1240S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (137 aa)
rpl23Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
rpl38Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
ENSCSEP00000021343Uncharacterized protein. (171 aa)
pabpc1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (632 aa)
RPS20Ribosomal protein S20. (64 aa)
rplp1Ribosomal protein, large, P1. (129 aa)
smg6SMG6 nonsense mediated mRNA decay factor. (1637 aa)
LOC103394163Uncharacterized protein. (152 aa)
NCBP1Nuclear cap binding protein subunit 1. (822 aa)
ENSCSEP00000019116Ribosomal protein L6. (273 aa)
rbm8aRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (175 aa)
rps28Ribosomal protein S28. (69 aa)
rps15Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
rps15aRibosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (157 aa)
smg1SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family. (3421 aa)
rps5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
LOC103397057Uncharacterized protein. (127 aa)
rpl14Ribosomal protein L14. (137 aa)
rpl15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (213 aa)
rpl2960S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (66 aa)
rpl31Ribosomal protein L31. (133 aa)
rpl23aRibosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (185 aa)
casc3Casc3 exon junction complex subunit. (815 aa)
rpl7Ribosomal protein L7. (221 aa)
arl6ip1ADP-ribosylation factor-like 6 interacting protein 1. (203 aa)
RPL19-2Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (245 aa)
LOC103397472Ribosomal protein L35. (123 aa)
rsad1Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (413 aa)
rpl37aRibosomal protein L37a. (92 aa)
LOC103398432Uncharacterized protein. (134 aa)
rps2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
rpl1360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (225 aa)
ENSCSEP00000012396Uncharacterized protein. (38 aa)
rpl11Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (180 aa)
ENSCSEP00000012299Ribosomal_L18e/L15P domain-containing protein. (105 aa)
ENSCSEP00000012296Ribosomal_L30 domain-containing protein. (112 aa)
LOC10339456740S ribosomal protein S27. (84 aa)
RPL19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
Smg7EST1 domain-containing protein. (176 aa)
ENSCSEP00000011098Uncharacterized protein. (85 aa)
rpl34Ribosomal protein L34. (117 aa)
LOC103380240Ribosomal protein L4. (369 aa)
LOC103399204Ribosomal_L16 domain-containing protein. (126 aa)
LOC103399068Ribosomal_L2 domain-containing protein. (114 aa)
etf1Eukaryotic translation termination factor 1b. (443 aa)
rnpepl1Arginyl aminopeptidase like 1. (707 aa)
rpl35aRibosomal protein L35a. (134 aa)
kxd1KxDL motif containing 1. (180 aa)
rpl12Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (170 aa)
rplp060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (315 aa)
rps740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
smg9SMG9 nonsense mediated mRNA decay factor. (508 aa)
ENSCSEP00000008401Uncharacterized protein. (113 aa)
rpl8Ribosomal protein L8. (257 aa)
upf3aUPF3A regulator of nonsense mediated mRNA decay. (459 aa)
ENSCSEP00000007657Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (151 aa)
rps2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (189 aa)
rpl9Ribosomal protein L9. (192 aa)
LOC103381298Uncharacterized protein. (178 aa)
LOC103384861Uncharacterized protein. (128 aa)
LOC10338255440S ribosomal protein S16. (146 aa)
LOC103382555Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
rps640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (250 aa)
rpl24Ribosomal protein L24. (151 aa)
rpl18a60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
rps2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
UPF2UPF2 regulator of nonsense mediated mRNA decay. (1227 aa)
ENSCSEP00000005425MIF4G domain-containing protein. (343 aa)
rpl10Ribosomal protein L10. (179 aa)
rps3a40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
LOC103390585Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (144 aa)
LOC103378172Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (196 aa)
LOC10337997540S ribosomal protein S27. (109 aa)
RPS2740S ribosomal protein S27. (111 aa)
rps2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (123 aa)
upf3bUPF3B regulator of nonsense mediated mRNA decay. (476 aa)
Rpl39Ribosomal protein L39. (49 aa)
Rps29Ribosomal protein S29. (91 aa)
rps27aRibosomal protein S27a. (156 aa)
LOC103378706Ribosomal protein, large P2, like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
rpl28Ribosomal protein L28. (137 aa)
rpl37Ribosomal protein L37; Binds to the 23S rRNA. (112 aa)
ENSCSEP00000001847Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (438 aa)
RPL27ARibosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (192 aa)
ENSCSEP00000001637Uncharacterized protein. (130 aa)
rps13Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
magohMago homolog, exon junction complex subunit. (134 aa)
rps4x40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
ENSCSEP00000000582Uncharacterized protein. (140 aa)
LOC103382382RNA binding protein with serine rich domain 1. (300 aa)
pabpc4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (627 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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