STRINGSTRING
LOC103378402 LOC103378402 usp11 usp11 usp1 usp1 uba1 uba1 rad50 rad50 USP15 USP15 LOC103392195 LOC103392195 sumo1 sumo1 ENSCSEP00000005323 ENSCSEP00000005323 LOC103383557 LOC103383557 usp4 usp4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103378402Small ubiquitin-related modifier. (94 aa)
usp11Ubiquitin carboxyl-terminal hydrolase. (707 aa)
usp1Ubiquitin carboxyl-terminal hydrolase. (798 aa)
uba1Ubiquitin-like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family. (1055 aa)
rad50RAD50 homolog, double strand break repair protein. (1319 aa)
USP15Ubiquitin specific peptidase 15; Belongs to the peptidase C19 family. (1045 aa)
LOC103392195Small ubiquitin-related modifier. (100 aa)
sumo1Small ubiquitin-related modifier. (101 aa)
ENSCSEP00000005323MDM2 proto-oncogene. (416 aa)
LOC103383557Small ubiquitin-related modifier. (96 aa)
usp4Ubiquitin specific peptidase 4 (proto-oncogene); Belongs to the peptidase C19 family. (1006 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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