15 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	brca1	Uncharacterized protein. (1217 aa)
	gapdh	Glyceraldehyde-3-phosphate dehydrogenase. (294 aa)
	LOC103397746	Myosin, light chain 7, regulatory. (172 aa)
	ENSCSEP00000031108	Kruppel-like factor 4. (401 aa)
	GFI1	Growth factor independent 1 transcriptional repressor. (397 aa)
	LOC103384347	LIM-domain binding 1b. (374 aa)
	LOC103391230	Uncharacterized protein. (712 aa)
	sox9	HMG box domain-containing protein. (489 aa)
	ar	Androgen receptor. (629 aa)
	foxl2	Forkhead box transcription factor Foxl2. (307 aa)
	lmo2	LIM domain only 2 (rhombotin-like 1). (162 aa)
	dr1	Down-regulator of transcription 1. (175 aa)
	myb	V-myb avian myeloblastosis viral oncogene homolog. (638 aa)
	hif1a	Uncharacterized protein. (735 aa)
	LOC103382384	SRY-box transcription factor 9a. (516 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSEP00000031108	GFI1	ENSCSEP00000031108	ENSCSEP00000027745	Kruppel-like factor 4.	Growth factor independent 1 transcriptional repressor.	0.604
ENSCSEP00000031108	LOC103384347	ENSCSEP00000031108	ENSCSEP00000025330	Kruppel-like factor 4.	LIM-domain binding 1b.	0.620
ENSCSEP00000031108	LOC103391230	ENSCSEP00000031108	ENSCSEP00000024626	Kruppel-like factor 4.	Uncharacterized protein.	0.449
ENSCSEP00000031108	LOC103397746	ENSCSEP00000031108	ENSCSEP00000031236	Kruppel-like factor 4.	Myosin, light chain 7, regulatory.	0.472
ENSCSEP00000031108	ar	ENSCSEP00000031108	ENSCSEP00000022097	Kruppel-like factor 4.	Androgen receptor.	0.449
ENSCSEP00000031108	brca1	ENSCSEP00000031108	ENSCSEP00000011390	Kruppel-like factor 4.	Uncharacterized protein.	0.620
ENSCSEP00000031108	dr1	ENSCSEP00000031108	ENSCSEP00000012835	Kruppel-like factor 4.	Down-regulator of transcription 1.	0.435
ENSCSEP00000031108	lmo2	ENSCSEP00000031108	ENSCSEP00000020468	Kruppel-like factor 4.	LIM domain only 2 (rhombotin-like 1).	0.617
GFI1	ENSCSEP00000031108	ENSCSEP00000027745	ENSCSEP00000031108	Growth factor independent 1 transcriptional repressor.	Kruppel-like factor 4.	0.604
GFI1	LOC103384347	ENSCSEP00000027745	ENSCSEP00000025330	Growth factor independent 1 transcriptional repressor.	LIM-domain binding 1b.	0.655
GFI1	LOC103391230	ENSCSEP00000027745	ENSCSEP00000024626	Growth factor independent 1 transcriptional repressor.	Uncharacterized protein.	0.550
GFI1	LOC103397746	ENSCSEP00000027745	ENSCSEP00000031236	Growth factor independent 1 transcriptional repressor.	Myosin, light chain 7, regulatory.	0.616
GFI1	ar	ENSCSEP00000027745	ENSCSEP00000022097	Growth factor independent 1 transcriptional repressor.	Androgen receptor.	0.550
GFI1	brca1	ENSCSEP00000027745	ENSCSEP00000011390	Growth factor independent 1 transcriptional repressor.	Uncharacterized protein.	0.666
GFI1	dr1	ENSCSEP00000027745	ENSCSEP00000012835	Growth factor independent 1 transcriptional repressor.	Down-regulator of transcription 1.	0.557
GFI1	lmo2	ENSCSEP00000027745	ENSCSEP00000020468	Growth factor independent 1 transcriptional repressor.	LIM domain only 2 (rhombotin-like 1).	0.687
LOC103382384	ar	ENSCSEP00000000538	ENSCSEP00000022097	SRY-box transcription factor 9a.	Androgen receptor.	0.435
LOC103382384	foxl2	ENSCSEP00000000538	ENSCSEP00000020710	SRY-box transcription factor 9a.	Forkhead box transcription factor Foxl2.	0.665
LOC103384347	ENSCSEP00000031108	ENSCSEP00000025330	ENSCSEP00000031108	LIM-domain binding 1b.	Kruppel-like factor 4.	0.620
LOC103384347	GFI1	ENSCSEP00000025330	ENSCSEP00000027745	LIM-domain binding 1b.	Growth factor independent 1 transcriptional repressor.	0.655