STRINGSTRING
sumo1 sumo1 Gata1 Gata1 myd88 myd88 irf1 irf1 LOC103392195 LOC103392195 LOC103388693 LOC103388693 cebpa cebpa SP3 SP3 Nf1 Nf1 LOC103378402 LOC103378402 LOC103383557 LOC103383557 Sox2 Sox2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sumo1Small ubiquitin-related modifier. (101 aa)
Gata1Uncharacterized protein. (289 aa)
myd88Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (285 aa)
irf1Interferon regulatory factor. (262 aa)
LOC103392195Small ubiquitin-related modifier. (100 aa)
LOC103388693Toll-like receptor 18; Belongs to the Toll-like receptor family. (898 aa)
cebpaCCAAT/enhancer-binding protein. (285 aa)
SP3Sp3a transcription factor. (747 aa)
Nf1Neurofibromin 1b. (2702 aa)
LOC103378402Small ubiquitin-related modifier. (94 aa)
LOC103383557Small ubiquitin-related modifier. (96 aa)
Sox2SRY-box transcription factor 2. (258 aa)
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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