12 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sumo1	Small ubiquitin-related modifier. (101 aa)
	Gata1	Uncharacterized protein. (289 aa)
	myd88	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (285 aa)
	irf1	Interferon regulatory factor. (262 aa)
	LOC103392195	Small ubiquitin-related modifier. (100 aa)
	LOC103388693	Toll-like receptor 18; Belongs to the Toll-like receptor family. (898 aa)
	cebpa	CCAAT/enhancer-binding protein. (285 aa)
	SP3	Sp3a transcription factor. (747 aa)
	Nf1	Neurofibromin 1b. (2702 aa)
	LOC103378402	Small ubiquitin-related modifier. (94 aa)
	LOC103383557	Small ubiquitin-related modifier. (96 aa)
	Sox2	SRY-box transcription factor 2. (258 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Gata1	Nf1	ENSCSEP00000028010	ENSCSEP00000004746	Uncharacterized protein.	Neurofibromin 1b.	0.567
Gata1	SP3	ENSCSEP00000028010	ENSCSEP00000008604	Uncharacterized protein.	Sp3a transcription factor.	0.683
Gata1	irf1	ENSCSEP00000028010	ENSCSEP00000018623	Uncharacterized protein.	Interferon regulatory factor.	0.441
LOC103378402	SP3	ENSCSEP00000004643	ENSCSEP00000008604	Small ubiquitin-related modifier.	Sp3a transcription factor.	0.409
LOC103378402	sumo1	ENSCSEP00000004643	ENSCSEP00000008829	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.663
LOC103383557	SP3	ENSCSEP00000004585	ENSCSEP00000008604	Small ubiquitin-related modifier.	Sp3a transcription factor.	0.499
LOC103383557	sumo1	ENSCSEP00000004585	ENSCSEP00000008829	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.656
LOC103388693	SP3	ENSCSEP00000015036	ENSCSEP00000008604	Toll-like receptor 18; Belongs to the Toll-like receptor family.	Sp3a transcription factor.	0.457
LOC103388693	myd88	ENSCSEP00000015036	ENSCSEP00000027899	Toll-like receptor 18; Belongs to the Toll-like receptor family.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.980
LOC103392195	SP3	ENSCSEP00000017973	ENSCSEP00000008604	Small ubiquitin-related modifier.	Sp3a transcription factor.	0.499
LOC103392195	sumo1	ENSCSEP00000017973	ENSCSEP00000008829	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.659
Nf1	Gata1	ENSCSEP00000004746	ENSCSEP00000028010	Neurofibromin 1b.	Uncharacterized protein.	0.567
Nf1	SP3	ENSCSEP00000004746	ENSCSEP00000008604	Neurofibromin 1b.	Sp3a transcription factor.	0.692
Nf1	Sox2	ENSCSEP00000004746	ENSCSEP00000002371	Neurofibromin 1b.	SRY-box transcription factor 2.	0.441
Nf1	irf1	ENSCSEP00000004746	ENSCSEP00000018623	Neurofibromin 1b.	Interferon regulatory factor.	0.474
SP3	Gata1	ENSCSEP00000008604	ENSCSEP00000028010	Sp3a transcription factor.	Uncharacterized protein.	0.683
SP3	LOC103378402	ENSCSEP00000008604	ENSCSEP00000004643	Sp3a transcription factor.	Small ubiquitin-related modifier.	0.409
SP3	LOC103383557	ENSCSEP00000008604	ENSCSEP00000004585	Sp3a transcription factor.	Small ubiquitin-related modifier.	0.499
SP3	LOC103388693	ENSCSEP00000008604	ENSCSEP00000015036	Sp3a transcription factor.	Toll-like receptor 18; Belongs to the Toll-like receptor family.	0.457
SP3	LOC103392195	ENSCSEP00000008604	ENSCSEP00000017973	Sp3a transcription factor.	Small ubiquitin-related modifier.	0.499