21 items (Cynoglossus semilaevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ddx17	DEAD-box helicase 17; Belongs to the DEAD box helicase family. (414 aa)
	LOC103379534	WT1 transcription factor a. (1198 aa)
	dhx35	DEAH-box helicase 35. (715 aa)
	LOC103395620	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (249 aa)
	actb	Putative beta-actin. (375 aa)
	LOC103380669	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (624 aa)
	figla	Folliculogenesis specific bHLH transcription factor. (196 aa)
	cdk7	Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (344 aa)
	LOC103391230	Uncharacterized protein. (712 aa)
	ENSCSEP00000022569	WT1 transcription factor b. (303 aa)
	LOC103378294	Serine and arginine rich splicing factor 1a. (250 aa)
	ar	Androgen receptor. (629 aa)
	LOC103381809	TATA box binding protein like 2. (450 aa)
	tra2a	Transformer 2 alpha homolog. (301 aa)
	tra2b	Transformer 2 beta homolog. (268 aa)
	DDX5	DEAD-box helicase 5; Belongs to the DEAD box helicase family. (633 aa)
	pgr	Progesterone receptor. (654 aa)
	ddx4	Uncharacterized protein; Belongs to the DEAD box helicase family. (679 aa)
	LOC103391595	U2 small nuclear RNA auxiliary factor 1. (212 aa)
	LOC103378456	Transformer 2 beta homolog. (314 aa)
	ESRRB	Estrogen-related receptor beta. (471 aa)

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX5	LOC103380669	ENSCSEP00000012516	ENSCSEP00000027784	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.	0.585
DDX5	LOC103381809	ENSCSEP00000012516	ENSCSEP00000019238	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	TATA box binding protein like 2.	0.510
DDX5	ddx4	ENSCSEP00000012516	ENSCSEP00000009577	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.493
DDX5	dhx35	ENSCSEP00000012516	ENSCSEP00000032725	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	DEAH-box helicase 35.	0.600
ESRRB	LOC103379534	ENSCSEP00000000917	ENSCSEP00000033049	Estrogen-related receptor beta.	WT1 transcription factor a.	0.577
LOC103378294	LOC103378456	ENSCSEP00000022407	ENSCSEP00000004438	Serine and arginine rich splicing factor 1a.	Transformer 2 beta homolog.	0.830
LOC103378294	LOC103391595	ENSCSEP00000022407	ENSCSEP00000004999	Serine and arginine rich splicing factor 1a.	U2 small nuclear RNA auxiliary factor 1.	0.781
LOC103378294	tra2a	ENSCSEP00000022407	ENSCSEP00000019042	Serine and arginine rich splicing factor 1a.	Transformer 2 alpha homolog.	0.830
LOC103378294	tra2b	ENSCSEP00000022407	ENSCSEP00000018229	Serine and arginine rich splicing factor 1a.	Transformer 2 beta homolog.	0.830
LOC103378456	LOC103378294	ENSCSEP00000004438	ENSCSEP00000022407	Transformer 2 beta homolog.	Serine and arginine rich splicing factor 1a.	0.830
LOC103379534	ESRRB	ENSCSEP00000033049	ENSCSEP00000000917	WT1 transcription factor a.	Estrogen-related receptor beta.	0.577
LOC103380669	DDX5	ENSCSEP00000027784	ENSCSEP00000012516	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	0.585
LOC103380669	LOC103381809	ENSCSEP00000027784	ENSCSEP00000019238	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.	TATA box binding protein like 2.	0.508
LOC103380669	ddx17	ENSCSEP00000027784	ENSCSEP00000017725	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	0.585
LOC103380669	pgr	ENSCSEP00000027784	ENSCSEP00000010596	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.	Progesterone receptor.	0.856
LOC103381809	DDX5	ENSCSEP00000019238	ENSCSEP00000012516	TATA box binding protein like 2.	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	0.510
LOC103381809	LOC103380669	ENSCSEP00000019238	ENSCSEP00000027784	TATA box binding protein like 2.	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.	0.508
LOC103381809	LOC103395620	ENSCSEP00000019238	ENSCSEP00000032319	TATA box binding protein like 2.	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.969
LOC103381809	actb	ENSCSEP00000019238	ENSCSEP00000029879	TATA box binding protein like 2.	Putative beta-actin.	0.552
LOC103381809	cdk7	ENSCSEP00000019238	ENSCSEP00000025765	TATA box binding protein like 2.	Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily.	0.755