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cooSII cooSII cooSV cooSV cooSIV cooSIV
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cooSIICarbon-monoxide dehydrogenase, catalytic subunit; CODH oxidizes carbon monoxide coupled, via CooF, to the reduction of a hydrogen cation by a hydrogenase (possibly CooH). (636 aa)
cooSVCarbon-monoxide dehydrogenase, catalytic subunit; Identified by similarity to GP:15826756; match to protein family HMM PF03063; match to protein family HMM TIGR01702. (629 aa)
cooSIVCarbon-monoxide dehydrogenase, catalytic subunit; Identified by similarity to GP:15826756; match to protein family HMM PF03063; match to protein family HMM TIGR01702. (633 aa)
Your Current Organism:
Carboxydothermus hydrogenoformans
NCBI taxonomy Id: 246194
Other names: C. hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans str. Z-2901
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