37 items (Mycolicibacterium smegmatis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABK70154.1	Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738. (704 aa)
	ABK74730.1	Oxidoreductase, molybdopterin-binding subunit; Identified by match to protein family HMM PF00941; match to protein family HMM PF03450. (331 aa)
	ABK71441.1	Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799. (173 aa)
	ABK75106.1	Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. (317 aa)
	ABK69650.1	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. (386 aa)
	ABK75483.1	Carbon monoxide dehydrogenase medium chain; Identified by match to protein family HMM PF00941; match to protein family HMM PF03450. (296 aa)
	ABK71192.1	[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799. (158 aa)
	ABK70147.1	Carbon-monoxide dehydrogenase, large subunit; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738; match to protein family HMM TIGR02416. (799 aa)
	ABK73526.1	Carbon monoxide dehydrogenase F protein; Identified by match to protein family HMM PF02625. (245 aa)
	ABK70293.1	ATPase associated with various cellular activities, AAA_5; Identified by match to protein family HMM PF00004; match to protein family HMM PF07726; match to protein family HMM PF07728. (300 aa)
	ABK73218.1	Carbon monoxide dehydrogenase subunit G (CoxG) family protein; Identified by match to protein family HMM PF06240. (231 aa)
	ABK75014.1	Conserved hypothetical protein; Identified by match to protein family HMM PF05762. (397 aa)
	ABK76221.1	Oxidoreductase; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738. (721 aa)
	ABK75175.1	Putative aldehyde or xanthine dehydrogenase, molybdopterin binding subunit protein; Identified by match to protein family HMM PF00941. (324 aa)
	ABK72521.1	Twin-arginine translocation pathway signal; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799. (205 aa)
	ABK74110.1	Conserved hypothetical protein. (182 aa)
	ABK71767.1	Carbon monoxide dehydrogenase subunit G (CoxG) superfamily protein; Identified by match to protein family HMM PF06240. (198 aa)
	ABK72154.1	Hypothetical protein; Identified by Glimmer2; putative. (105 aa)
	ABK74297.1	Hypothetical protein; Identified by Glimmer2; putative. (326 aa)
	ABK74472.1	Transporter ATPase; Identified by match to protein family HMM PF00005. (266 aa)
	ABK72289.1	Transporter permease 1; Identified by match to protein family HMM PF00528. (282 aa)
	ABK69710.1	Transporter permease 2, putative; Identified by match to protein family HMM PF00528. (262 aa)
	ABK74659.1	Carbon-monoxide dehydrogenase; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738. (777 aa)
	ABK75536.1	Nicotine dehydrogenase chain A; Identified by match to protein family HMM PF00941. (293 aa)
	ABK73128.1	[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799. (168 aa)
	ABK76148.1	Adenine deaminase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969. (406 aa)
	ABK69766.1	L-carnitine dehydratase/bile acid-inducible protein F; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. (411 aa)
	ABK69837.1	acyl-CoA thioesterase; Identified by match to protein family HMM PF02551. (269 aa)
	ABK71196.1	Carbon-monoxide dehydrogenase; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738. (786 aa)
	ABK70166.1	Carbon monoxide dehydrogenase, medium chain; Identified by match to protein family HMM PF00941. (272 aa)
	ABK70053.1	[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799. (161 aa)
	ABK74143.1	Riboflavin biosynthesis protein RibD C- domain protein; Identified by match to protein family HMM PF01872. (185 aa)
	ABK73221.1	Nicotine dehydrogenase; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738. (784 aa)
	ABK75316.1	Putative carbon monoxide dehydrogenase subunit G; Identified by match to protein family HMM PF06240. (236 aa)
	ABK71665.1	Carbon monoxide dehydrogenase medium chain; Identified by match to protein family HMM PF00941; match to protein family HMM PF03450. (295 aa)
	ABK73876.1	[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799. (170 aa)
	ABK72702.1	Identified by match to protein family HMM PF03446; match to protein family HMM PF03807. (299 aa)

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK69650.1	ABK70053.1	MSMEG_0743	MSMEG_2951	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.	0.792
ABK69650.1	ABK70147.1	MSMEG_0743	MSMEG_0746	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	Carbon-monoxide dehydrogenase, large subunit; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738; match to protein family HMM TIGR02416.	0.904
ABK69650.1	ABK70154.1	MSMEG_0743	MSMEG_0684	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738.	0.726
ABK69650.1	ABK70166.1	MSMEG_0743	MSMEG_2950	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	Carbon monoxide dehydrogenase, medium chain; Identified by match to protein family HMM PF00941.	0.750
ABK69650.1	ABK70293.1	MSMEG_0743	MSMEG_0748	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	ATPase associated with various cellular activities, AAA_5; Identified by match to protein family HMM PF00004; match to protein family HMM PF07726; match to protein family HMM PF07728.	0.831
ABK69650.1	ABK71192.1	MSMEG_0743	MSMEG_0745	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.	0.919
ABK69650.1	ABK71196.1	MSMEG_0743	MSMEG_2949	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	Carbon-monoxide dehydrogenase; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738.	0.787
ABK69650.1	ABK71441.1	MSMEG_0743	MSMEG_0686	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.	0.718
ABK69650.1	ABK71665.1	MSMEG_0743	MSMEG_5882	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	Carbon monoxide dehydrogenase medium chain; Identified by match to protein family HMM PF00941; match to protein family HMM PF03450.	0.835
ABK69650.1	ABK71767.1	MSMEG_0743	MSMEG_2455	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	Carbon monoxide dehydrogenase subunit G (CoxG) superfamily protein; Identified by match to protein family HMM PF06240.	0.649
ABK69650.1	ABK72521.1	MSMEG_0743	MSMEG_0872	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	Twin-arginine translocation pathway signal; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.	0.757
ABK69650.1	ABK73128.1	MSMEG_0743	MSMEG_2464	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.	0.779
ABK69650.1	ABK73218.1	MSMEG_0743	MSMEG_0749	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	Carbon monoxide dehydrogenase subunit G (CoxG) family protein; Identified by match to protein family HMM PF06240.	0.846
ABK69650.1	ABK73221.1	MSMEG_0743	MSMEG_5880	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	Nicotine dehydrogenase; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738.	0.891
ABK69650.1	ABK73526.1	MSMEG_0743	MSMEG_0747	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	Carbon monoxide dehydrogenase F protein; Identified by match to protein family HMM PF02625.	0.848
ABK69650.1	ABK73876.1	MSMEG_0743	MSMEG_5883	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.	0.790
ABK69650.1	ABK74110.1	MSMEG_0743	MSMEG_1806	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	Conserved hypothetical protein.	0.894
ABK69650.1	ABK74659.1	MSMEG_0743	MSMEG_2462	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	Carbon-monoxide dehydrogenase; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738.	0.809
ABK69650.1	ABK74730.1	MSMEG_0743	MSMEG_0685	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	Oxidoreductase, molybdopterin-binding subunit; Identified by match to protein family HMM PF00941; match to protein family HMM PF03450.	0.542
ABK69650.1	ABK75014.1	MSMEG_0743	MSMEG_0751	Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.	Conserved hypothetical protein; Identified by match to protein family HMM PF05762.	0.868