Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70031.1 | ABK70275.1 | MSMEG_5036 | MSMEG_3155 | Identified by match to protein family HMM PF01694. | Band 7 protein; Identified by match to protein family HMM PF01145. | 0.716 |
| ABK70031.1 | ABK74394.1 | MSMEG_5036 | MSMEG_4576 | Identified by match to protein family HMM PF01694. | SpfH domain protein; Identified by match to protein family HMM PF01145. | 0.713 |
| ABK70031.1 | ftsH | MSMEG_5036 | MSMEG_6105 | Identified by match to protein family HMM PF01694. | Cell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.667 |
| ABK70160.1 | ABK70298.1 | MSMEG_2792 | MSMEG_0713 | Clp amino terminal domain protein; Identified by match to protein family HMM PF02861. | Transcriptional regulator, MerR family protein; Identified by match to protein family HMM PF00376. | 0.439 |
| ABK70160.1 | ABK75774.1 | MSMEG_2792 | MSMEG_0699 | Clp amino terminal domain protein; Identified by match to protein family HMM PF02861. | Conserved hypothetical proline rich protein. | 0.696 |
| ABK70160.1 | clpP | MSMEG_2792 | MSMEG_4672 | Clp amino terminal domain protein; Identified by match to protein family HMM PF02861. | Clp protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.856 |
| ABK70160.1 | clpP-2 | MSMEG_2792 | MSMEG_4673 | Clp amino terminal domain protein; Identified by match to protein family HMM PF02861. | Clp protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.856 |
| ABK70160.1 | clpX | MSMEG_2792 | MSMEG_4671 | Clp amino terminal domain protein; Identified by match to protein family HMM PF02861. | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.510 |
| ABK70160.1 | dnaJ | MSMEG_2792 | MSMEG_0711 | Clp amino terminal domain protein; Identified by match to protein family HMM PF02861. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.723 |
| ABK70160.1 | dnaK | MSMEG_2792 | MSMEG_0709 | Clp amino terminal domain protein; Identified by match to protein family HMM PF02861. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.695 |
| ABK70160.1 | ftsH | MSMEG_2792 | MSMEG_6105 | Clp amino terminal domain protein; Identified by match to protein family HMM PF02861. | Cell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.431 |
| ABK70160.1 | groL | MSMEG_2792 | MSMEG_0880 | Clp amino terminal domain protein; Identified by match to protein family HMM PF02861. | Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.559 |
| ABK70160.1 | groL-2 | MSMEG_2792 | MSMEG_1583 | Clp amino terminal domain protein; Identified by match to protein family HMM PF02861. | Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.554 |
| ABK70160.1 | groL-3 | MSMEG_2792 | MSMEG_1978 | Clp amino terminal domain protein; Identified by match to protein family HMM PF02861. | Chaperonin GroL; Plays an essential role in the productive folding of MimA and MimC, and thus in the formation of the active MimABCD complex. Belongs to the chaperonin (HSP60) family. | 0.559 |
| ABK70160.1 | groS | MSMEG_2792 | MSMEG_1582 | Clp amino terminal domain protein; Identified by match to protein family HMM PF02861. | Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.680 |
| ABK70160.1 | grpE | MSMEG_2792 | MSMEG_0710 | Clp amino terminal domain protein; Identified by match to protein family HMM PF02861. | Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depend [...] | 0.812 |
| ABK70160.1 | hrcA | MSMEG_2792 | MSMEG_4505 | Clp amino terminal domain protein; Identified by match to protein family HMM PF02861. | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.617 |
| ABK70160.1 | lon | MSMEG_2792 | MSMEG_3582 | Clp amino terminal domain protein; Identified by match to protein family HMM PF02861. | ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.664 |
| ABK70275.1 | ABK70031.1 | MSMEG_3155 | MSMEG_5036 | Band 7 protein; Identified by match to protein family HMM PF01145. | Identified by match to protein family HMM PF01694. | 0.716 |
| ABK70275.1 | ABK75774.1 | MSMEG_3155 | MSMEG_0699 | Band 7 protein; Identified by match to protein family HMM PF01145. | Conserved hypothetical proline rich protein. | 0.592 |
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