7 items (Mycolicibacterium smegmatis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	ripA	Secreted cell wall-associated hydrolase; Peptidoglycan endopeptidase that cleaves the bond between D- glutamate and meso-diaminopimelate. Binds and degrades high-molecular weight peptidoglycan. Required for normal separation of daughter cells after cell division and for cell wall integrity (By similarity). (497 aa)
	ABK73137.1	Resuscitation-promoting factor; Identified by match to protein family HMM PF06737. (107 aa)
	ABK72792.1	Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510. (275 aa)
	ABK71860.1	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. (264 aa)
	ABK75413.1	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510. (536 aa)
	ponA1	Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity). (785 aa)
	ABK72323.1	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520. (396 aa)

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK71860.1	ABK72323.1	MSMEG_6281	MSMEG_6935	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520.	0.989
ABK71860.1	ABK72792.1	MSMEG_6281	MSMEG_5315	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.	Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510.	0.892
ABK71860.1	ABK75413.1	MSMEG_6281	MSMEG_6406	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510.	0.900
ABK71860.1	ponA1	MSMEG_6281	MSMEG_6900	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.	Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity).	0.490
ABK71860.1	ripA	MSMEG_6281	MSMEG_3145	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.	Secreted cell wall-associated hydrolase; Peptidoglycan endopeptidase that cleaves the bond between D- glutamate and meso-diaminopimelate. Binds and degrades high-molecular weight peptidoglycan. Required for normal separation of daughter cells after cell division and for cell wall integrity (By similarity).	0.625
ABK72323.1	ABK71860.1	MSMEG_6935	MSMEG_6281	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520.	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.	0.989
ABK72323.1	ABK72792.1	MSMEG_6935	MSMEG_5315	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520.	Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510.	0.896
ABK72323.1	ABK73137.1	MSMEG_6935	MSMEG_4643	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520.	Resuscitation-promoting factor; Identified by match to protein family HMM PF06737.	0.568
ABK72323.1	ABK75413.1	MSMEG_6935	MSMEG_6406	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520.	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510.	0.870
ABK72323.1	ponA1	MSMEG_6935	MSMEG_6900	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520.	Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity).	0.449
ABK72323.1	ripA	MSMEG_6935	MSMEG_3145	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520.	Secreted cell wall-associated hydrolase; Peptidoglycan endopeptidase that cleaves the bond between D- glutamate and meso-diaminopimelate. Binds and degrades high-molecular weight peptidoglycan. Required for normal separation of daughter cells after cell division and for cell wall integrity (By similarity).	0.435
ABK72792.1	ABK71860.1	MSMEG_5315	MSMEG_6281	Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510.	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.	0.892
ABK72792.1	ABK72323.1	MSMEG_5315	MSMEG_6935	Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510.	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520.	0.896
ABK72792.1	ABK75413.1	MSMEG_5315	MSMEG_6406	Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510.	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510.	0.906
ABK73137.1	ABK72323.1	MSMEG_4643	MSMEG_6935	Resuscitation-promoting factor; Identified by match to protein family HMM PF06737.	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520.	0.568
ABK73137.1	ponA1	MSMEG_4643	MSMEG_6900	Resuscitation-promoting factor; Identified by match to protein family HMM PF06737.	Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity).	0.544
ABK73137.1	ripA	MSMEG_4643	MSMEG_3145	Resuscitation-promoting factor; Identified by match to protein family HMM PF06737.	Secreted cell wall-associated hydrolase; Peptidoglycan endopeptidase that cleaves the bond between D- glutamate and meso-diaminopimelate. Binds and degrades high-molecular weight peptidoglycan. Required for normal separation of daughter cells after cell division and for cell wall integrity (By similarity).	0.914
ABK75413.1	ABK71860.1	MSMEG_6406	MSMEG_6281	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510.	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.	0.900
ABK75413.1	ABK72323.1	MSMEG_6406	MSMEG_6935	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510.	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520.	0.870
ABK75413.1	ABK72792.1	MSMEG_6406	MSMEG_5315	N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510.	Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510.	0.906