5 items (Mycolicibacterium smegmatis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABK70540.1	ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848. (100 aa)
	cbiM	Cobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891. (228 aa)
	ABK72168.1	Cobalt transport protein CbiM. (112 aa)
	cbiQ	Cobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454. (259 aa)
	ABK74519.1	Cobalt transport protein ATP-binding subunit; Identified by match to protein family HMM PF00005. (249 aa)

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK70540.1	ABK72168.1	MSMEG_2606	MSMEG_2608	ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848.	Cobalt transport protein CbiM.	0.611
ABK70540.1	ABK74519.1	MSMEG_2606	MSMEG_2610	ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848.	Cobalt transport protein ATP-binding subunit; Identified by match to protein family HMM PF00005.	0.578
ABK70540.1	cbiM	MSMEG_2606	MSMEG_2607	ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848.	Cobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891.	0.611
ABK70540.1	cbiQ	MSMEG_2606	MSMEG_2609	ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848.	Cobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454.	0.627
ABK72168.1	ABK70540.1	MSMEG_2608	MSMEG_2606	Cobalt transport protein CbiM.	ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848.	0.611
ABK72168.1	ABK74519.1	MSMEG_2608	MSMEG_2610	Cobalt transport protein CbiM.	Cobalt transport protein ATP-binding subunit; Identified by match to protein family HMM PF00005.	0.996
ABK72168.1	cbiM	MSMEG_2608	MSMEG_2607	Cobalt transport protein CbiM.	Cobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891.	0.987
ABK72168.1	cbiQ	MSMEG_2608	MSMEG_2609	Cobalt transport protein CbiM.	Cobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454.	0.996
ABK74519.1	ABK70540.1	MSMEG_2610	MSMEG_2606	Cobalt transport protein ATP-binding subunit; Identified by match to protein family HMM PF00005.	ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848.	0.578
ABK74519.1	ABK72168.1	MSMEG_2610	MSMEG_2608	Cobalt transport protein ATP-binding subunit; Identified by match to protein family HMM PF00005.	Cobalt transport protein CbiM.	0.996
ABK74519.1	cbiM	MSMEG_2610	MSMEG_2607	Cobalt transport protein ATP-binding subunit; Identified by match to protein family HMM PF00005.	Cobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891.	0.997
ABK74519.1	cbiQ	MSMEG_2610	MSMEG_2609	Cobalt transport protein ATP-binding subunit; Identified by match to protein family HMM PF00005.	Cobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454.	0.999
cbiM	ABK70540.1	MSMEG_2607	MSMEG_2606	Cobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891.	ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848.	0.611
cbiM	ABK72168.1	MSMEG_2607	MSMEG_2608	Cobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891.	Cobalt transport protein CbiM.	0.987
cbiM	ABK74519.1	MSMEG_2607	MSMEG_2610	Cobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891.	Cobalt transport protein ATP-binding subunit; Identified by match to protein family HMM PF00005.	0.997
cbiM	cbiQ	MSMEG_2607	MSMEG_2609	Cobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891.	Cobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454.	0.999
cbiQ	ABK70540.1	MSMEG_2609	MSMEG_2606	Cobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454.	ArsR-family protein transcriptional regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF07848.	0.627
cbiQ	ABK72168.1	MSMEG_2609	MSMEG_2608	Cobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454.	Cobalt transport protein CbiM.	0.996
cbiQ	ABK74519.1	MSMEG_2609	MSMEG_2610	Cobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454.	Cobalt transport protein ATP-binding subunit; Identified by match to protein family HMM PF00005.	0.999
cbiQ	cbiM	MSMEG_2609	MSMEG_2607	Cobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454.	Cobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891.	0.999