STRINGSTRING
ABK70162.1 ABK70162.1 ABK76212.1 ABK76212.1 mycP1 mycP1 ABK69870.1 ABK69870.1 ABK74328.1 ABK74328.1 ABK71297.1 ABK71297.1 ABK73177.1 ABK73177.1 rip2 rip2 ABK70355.1 ABK70355.1 ABK70886.1 ABK70886.1 ABK70592.1 ABK70592.1 ABK73795.1 ABK73795.1 htpX htpX ABK71175.1 ABK71175.1 ABK75057.1 ABK75057.1 ABK70622.1 ABK70622.1 sppA sppA map map ABK74029.1 ABK74029.1 ABK75455.1 ABK75455.1 ABK69620.1 ABK69620.1 ABK75602.1 ABK75602.1 ABK73230.1 ABK73230.1 ABK70787.1 ABK70787.1 ABK73059.1 ABK73059.1 ABK75131.1 ABK75131.1 ABK74188.1 ABK74188.1 ABK71649.1 ABK71649.1 ABK69949.1 ABK69949.1 ABK69842.1 ABK69842.1 ABK75661.1 ABK75661.1 ABK73743.1 ABK73743.1 ABK71878.1 ABK71878.1 ABK73953.1 ABK73953.1 lepB lepB ABK70707.1 ABK70707.1 rip1 rip1 map-2 map-2 ABK74866.1 ABK74866.1 ABK69809.1 ABK69809.1 ABK69888.1 ABK69888.1 ABK74215.1 ABK74215.1 lexA lexA ABK75677.1 ABK75677.1 ABK75300.1 ABK75300.1 ABK73060.1 ABK73060.1 ABK71173.1 ABK71173.1 ABK71489.1 ABK71489.1 ABK76054.1 ABK76054.1 ripA ripA ABK71832.1 ABK71832.1 ABK71936.1 ABK71936.1 ABK70275.1 ABK70275.1 lspA lspA ABK74450.1 ABK74450.1 ABK72616.1 ABK72616.1 ABK72298.1 ABK72298.1 ABK74896.1 ABK74896.1 lon lon ABK75672.1 ABK75672.1 ABK72473.1 ABK72473.1 ABK75947.1 ABK75947.1 ABK73527.1 ABK73527.1 ABK74578.1 ABK74578.1 pafA pafA ABK74685.1 ABK74685.1 prcA prcA prcB prcB pup pup dop dop mpa mpa ABK75673.1 ABK75673.1 ABK75805.1 ABK75805.1 ABK76047.1 ABK76047.1 ABK71201.1 ABK71201.1 pepA pepA ABK75211.1 ABK75211.1 ABK76060.1 ABK76060.1 ABK75377.1 ABK75377.1 ABK74071.1 ABK74071.1 ABK72153.1 ABK72153.1 ABK75852.1 ABK75852.1 ABK74394.1 ABK74394.1 ABK75475.1 ABK75475.1 clpP clpP clpP-2 clpP-2 pepN pepN ABK74902.1 ABK74902.1 ABK72042.1 ABK72042.1 ABK70764.1 ABK70764.1 ABK69799.1 ABK69799.1 ABK74179.1 ABK74179.1 ABK73517.1 ABK73517.1 ABK75030.1 ABK75030.1 clpS clpS ABK71423.1 ABK71423.1 ABK70031.1 ABK70031.1 map-3 map-3 ABK71828.1 ABK71828.1 ABK76069.1 ABK76069.1 ABK75616.1 ABK75616.1 ABK69603.1 ABK69603.1 ABK72137.1 ABK72137.1 ABK74091.1 ABK74091.1 ABK75051.1 ABK75051.1 map-4 map-4 ABK76028.1 ABK76028.1 apeB apeB ABK72655.1 ABK72655.1 ABK73946.1 ABK73946.1 ftsH ftsH dacB dacB ABK75500.1 ABK75500.1 ABK71514.1 ABK71514.1 ABK71619.1 ABK71619.1 ABK70790.1 ABK70790.1 ABK70561.1 ABK70561.1 ABK75508.1 ABK75508.1 ABK73061.1 ABK73061.1 ABK75764.1 ABK75764.1 ABK71498.1 ABK71498.1 ponA1 ponA1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABK70162.1Putative hydrolase; Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976. (557 aa)
ABK76212.1Antigen MTB48. (520 aa)
mycP1Membrane-anchored mycosin mycp1; May play a dual role in regulation of ESX-1 secretion and virulence. Acts as a protease that cleaves EspB. Belongs to the peptidase S8 family. (449 aa)
ABK69870.1Metallopeptidase; Identified by match to protein family HMM PF01431; match to protein family HMM PF05649. (666 aa)
ABK74328.1Intracellular protease, PfpI family protein; Identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382. (188 aa)
ABK71297.1Identified by match to protein family HMM PF00082. (459 aa)
ABK73177.1Conserved hypothetical protein. (399 aa)
rip2Identified by match to protein family HMM PF02163. (259 aa)
ABK70355.1Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389. (503 aa)
ABK70886.1Leupeptin-inactivating enzyme 1; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389. (483 aa)
ABK70592.1ATP-dependent protease La (LON) domain subfamily protein; Identified by match to protein family HMM PF02190. (208 aa)
ABK73795.1Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. (671 aa)
htpXPutative protease HtpX; Identified by match to protein family HMM PF01435; Belongs to the peptidase M48B family. (295 aa)
ABK71175.1Hypothetical protein; Identified by Glimmer2; putative. (69 aa)
ABK75057.1Peptidase S15; Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976. (567 aa)
ABK70622.1Creatininase subfamily protein; Identified by match to protein family HMM PF02633. (222 aa)
sppASignal peptide peptidase SppA, 67K type; Identified by match to protein family HMM PF01343; match to protein family HMM TIGR00705; match to protein family HMM TIGR00706. (594 aa)
mapMethionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (265 aa)
ABK74029.1D-aminopeptidase; Identified by match to protein family HMM PF03576. (369 aa)
ABK75455.1Hypothetical protein; Identified by Glimmer2; putative. (165 aa)
ABK69620.1Identified by match to protein family HMM PF00082; Belongs to the peptidase S8 family. (442 aa)
ABK75602.1Kumamolisin. (550 aa)
ABK73230.1D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. (397 aa)
ABK70787.1Identified by match to protein family HMM PF00877. (355 aa)
ABK73059.1Conserved hypothetical protein; Identified by match to protein family HMM PF02586; Belongs to the SOS response-associated peptidase family. (262 aa)
ABK75131.1Identified by match to protein family HMM PF02557. (185 aa)
ABK74188.1PDZ domain family protein. (345 aa)
ABK71649.1D-aminopeptidase; Identified by match to protein family HMM PF03576. (367 aa)
ABK69949.1Aminopeptidase, putative; Identified by match to protein family HMM PF00557. (433 aa)
ABK69842.1Alpha/beta hydrolase; Identified by match to protein family HMM PF00561. (298 aa)
ABK75661.1Peptidase M52, hydrogen uptake protein; Identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072. (265 aa)
ABK73743.1D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. (275 aa)
ABK71878.1D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. (296 aa)
ABK73953.1LppW protein. (314 aa)
lepBSignal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family. (289 aa)
ABK70707.1Xaa-Pro aminopeptidase; Identified by match to protein family HMM PF00557. (388 aa)
rip1Zinc metalloprotease; A probable intramembrane site-2 protease (S2P) that cleaves type-2 transmembrane proteins within their membrane-spanning domains. Degrades PbpB (PBP3, FtsI) under conditions of oxidatives stress; degradation is inhibited by Wag31-PbpB interaction. Also cleaves anti- sigma factors RskA, RslA and RslM. Site-1 proteases have not yet been identified in this organism; Belongs to the peptidase M50B family. (406 aa)
map-2Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (285 aa)
ABK74866.1Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family. (434 aa)
ABK69809.1Proline imino-peptidase; Identified by match to protein family HMM PF00561; match to protein family HMM TIGR01250; Belongs to the peptidase S33 family. (309 aa)
ABK69888.1Peptidase M52, hydrogen uptake protein; Identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072. (160 aa)
ABK74215.1Conserved hypothetical protein. (441 aa)
lexALexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (243 aa)
ABK75677.1Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561. (529 aa)
ABK75300.1Conserved hypothetical protein. (264 aa)
ABK73060.1Metallopeptidase, zinc binding; Identified by match to protein family HMM PF04228. (297 aa)
ABK71173.1Transglutaminase domain protein; Identified by match to protein family HMM PF01841. (306 aa)
ABK71489.1Peptidase, A24 (type IV prepilin peptidase) family protein; Identified by match to protein family HMM PF01478. (147 aa)
ABK76054.1Identified by match to protein family HMM PF00557. (378 aa)
ripASecreted cell wall-associated hydrolase; Peptidoglycan endopeptidase that cleaves the bond between D- glutamate and meso-diaminopimelate. Binds and degrades high-molecular weight peptidoglycan. Required for normal separation of daughter cells after cell division and for cell wall integrity (By similarity). (497 aa)
ABK71832.1Invasin 1; Identified by match to protein family HMM PF00877. (229 aa)
ABK71936.1Membrane protein implicated in regulation of membrane protease activity; Identified by match to protein family HMM PF01957. (144 aa)
ABK70275.1Band 7 protein; Identified by match to protein family HMM PF01145. (408 aa)
lspALipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins. (235 aa)
ABK74450.1Glutamyl aminopeptidase, M42 family protein; Identified by match to protein family HMM PF01546; match to protein family HMM PF05343. (361 aa)
ABK72616.1Probable conserved integral membrane protein; Identified by match to protein family HMM PF02517. (216 aa)
ABK72298.1Conserved hypothetical protein. (260 aa)
ABK74896.1Identified by match to protein family HMM PF01435. (373 aa)
lonATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (779 aa)
ABK75672.1Probable conserved integral membrane protein; Identified by match to protein family HMM PF02517. (249 aa)
ABK72473.1Integral membrane protein; Identified by match to protein family HMM PF01435; match to protein family HMM PF05569. (318 aa)
ABK75947.1Dipeptidase 2; Identified by match to protein family HMM PF01244. (361 aa)
ABK73527.1Integral membrane protein. (386 aa)
ABK74578.1Proline dipeptidase; Identified by match to protein family HMM PF00557; Belongs to the peptidase M24B family. (375 aa)
pafAProteasome component; Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction likely involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine. Belongs to the Pup ligase/Pup deamidase family. Pup- conjugating enzyme subfamily. (452 aa)
ABK74685.1Hypothetical protein; Identified by Glimmer2; putative. (360 aa)
prcAProteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The M.smegmatis proteasome is able to cleave oligopeptides after hydrophobic residues, thus displaying chymotrypsin-like activity. In complex with the ATPase Mpa, degrades protein targets conjugated to a prokaryotic ubiquitin- like protein (Pup). Identified substrates of the M.smegmatis proteasome are the pupylated SodA and Ino1 proteins. The Pup- proteasome system (PPS) is essential for survival under starvation; PPS likely functions to recycle a [...] (246 aa)
prcBProteasome beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The M.smegmatis proteasome is able to cleave oligopeptides after hydrophobic residues, thus displaying chymotrypsin-like activity. In complex with the ATPase Mpa, degrades protein targets conjugated to a prokaryotic ubiquitin- like protein (Pup). Among the identified substrates of the M.smegmatis proteasome are the pupylated SodA and Ino1 proteins. The Pup-proteasome system (PPS) is essential for survival under starvation; PPS likely functions to r [...] (280 aa)
pupConserved hypothetical protein; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Among the identified substrates are the SodA and Ino1 proteins. (64 aa)
dopProteasome component; Specifically catalyzes the deamidation of the C-terminal glutamine of the prokaryotic ubiquitin-like protein Pup to glutamate, thereby rendering Pup competent for conjugation. Probably also displays depupylase (DPUP) activity, removing conjugated Pup from target proteins; thus may be involved in the recycling of Pup and may function similarly to deubiquitinases (DUBs) in eukaryotes to prevent or promote proteasomal degradation of certain proteins. Belongs to the Pup ligase/Pup deamidase family. Pup deamidase subfamily. (498 aa)
mpaATPase, AAA family protein; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. (613 aa)
ABK75673.1Peptidase M52, hydrogen uptake protein; Identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072. (155 aa)
ABK75805.1Peptidase S8 and S53, subtilisin, kexin, sedolisin; Identified by match to protein family HMM PF00082. (613 aa)
ABK76047.1Conserved hypothetical protein. (265 aa)
ABK71201.1Identified by match to protein family HMM PF00877. (381 aa)
pepACytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. (519 aa)
ABK75211.1Conserved hypothetical protein. (115 aa)
ABK76060.1Penicillin binding protein transpeptidase domain protein; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM PF03793. (803 aa)
ABK75377.1Alpha/beta hydrolase. (311 aa)
ABK74071.1CalR5 protein. (453 aa)
ABK72153.1Modulator of DNA gyrase; Identified by match to protein family HMM PF01523. (505 aa)
ABK75852.1Conserved hypothetical protein; Identified by match to protein family HMM PF01841. (279 aa)
ABK74394.1SpfH domain protein; Identified by match to protein family HMM PF01145. (268 aa)
ABK75475.1Peptidase S9, prolyl oligopeptidase; Identified by match to protein family HMM PF00326; match to protein family HMM PF05448. (663 aa)
clpPClp protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (218 aa)
clpP-2Clp protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (203 aa)
pepNIdentified by match to protein family HMM PF01433; match to protein family HMM TIGR02412. (860 aa)
ABK74902.1Peptidase S9, prolyl oligopeptidase; Identified by match to protein family HMM PF00326; match to protein family HMM PF02129. (620 aa)
ABK72042.1Identified by match to protein family HMM PF00557. (377 aa)
ABK70764.1Identified by match to protein family HMM PF00557. (425 aa)
ABK69799.1Putative neutral zinc metallopeptidase. (481 aa)
ABK74179.1Identified by match to protein family HMM PF01694. (219 aa)
ABK73517.1Identified by match to protein family HMM PF01398. (138 aa)
ABK75030.1Endo-type 6-aminohexanoate oligomer hydrolase; Identified by match to protein family HMM PF03576. (339 aa)
clpSATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (100 aa)
ABK71423.1LpqM protein. (480 aa)
ABK70031.1Identified by match to protein family HMM PF01694. (250 aa)
map-3Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (254 aa)
ABK71828.1Trypsin; Identified by match to protein family HMM PF00089. (498 aa)
ABK76069.1Hypothetical protein; Identified by Glimmer2; putative. (395 aa)
ABK75616.1Conserved hypothetical protein. (337 aa)
ABK69603.1Caax amino protease family protein; Identified by match to protein family HMM PF02517. (227 aa)
ABK72137.1Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976. (561 aa)
ABK74091.1Peptidase S1 and S6, chymotrypsin/Hap; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595. (444 aa)
ABK75051.1Peptidase; Identified by match to protein family HMM PF00326; match to protein family HMM PF02129. (617 aa)
map-4Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (254 aa)
ABK76028.1Caax amino protease family protein; Identified by match to protein family HMM PF02517. (218 aa)
apeBAspartyl aminopeptidase; Identified by match to protein family HMM PF02127; match to protein family HMM PF05343. (421 aa)
ABK72655.1Protease 2; Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. (718 aa)
ABK73946.1D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. (218 aa)
ftsHCell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (770 aa)
dacBD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; Carboxypeptidase that cleaves terminal D-alanine from peptidoglycan in the mycobacterial cell wall. May cleave L-Lys-D-Ala and/or D-Ala-D-Ala peptide bonds. Exerts important effects on mycobacterial cell morphology and cell division. Belongs to the peptidase S13 family. (480 aa)
ABK75500.1Metallopeptidase; Identified by match to protein family HMM PF01433. (445 aa)
ABK71514.1Secreted protein. (226 aa)
ABK71619.1Serine protease; Identified by match to protein family HMM PF00089; match to protein family HMM PF02674. (396 aa)
ABK70790.1Transglycosylase; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM PF03793. (788 aa)
ABK70561.1Trypsin; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595. (340 aa)
ABK75508.1Abortive infection protein; Identified by match to protein family HMM PF02517. (260 aa)
ABK73061.1Hydrolase of the alpha/beta superfamily protein. (253 aa)
ABK75764.1Caax amino protease family protein, putative; Identified by match to protein family HMM PF02517. (270 aa)
ABK71498.1Creatinine amidohydrolase; Identified by match to protein family HMM PF02633. (274 aa)
ponA1Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity). (785 aa)
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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