Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69728.1 | ABK70175.1 | MSMEG_2416 | MSMEG_6929 | Conserved hypothetical protein. | Integral membrane protein MviN, putative; Identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695. | 0.449 |
| ABK69728.1 | ABK73545.1 | MSMEG_2416 | MSMEG_5083 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.743 |
| ABK69728.1 | ftsW | MSMEG_2416 | MSMEG_4228 | Conserved hypothetical protein. | Cell division protein FtsW; Identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; Belongs to the SEDS family. | 0.536 |
| ABK69728.1 | pbpB | MSMEG_2416 | MSMEG_4233 | Conserved hypothetical protein. | Penicillin binding protein transpeptidase domain protein; Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; Belongs to the transpeptidase family. | 0.477 |
| ABK70175.1 | ABK69728.1 | MSMEG_6929 | MSMEG_2416 | Integral membrane protein MviN, putative; Identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695. | Conserved hypothetical protein. | 0.449 |
| ABK70175.1 | ABK71056.1 | MSMEG_6929 | MSMEG_0032 | Integral membrane protein MviN, putative; Identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695. | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | 0.556 |
| ABK70175.1 | ABK73545.1 | MSMEG_6929 | MSMEG_5083 | Integral membrane protein MviN, putative; Identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695. | Conserved hypothetical protein. | 0.402 |
| ABK70175.1 | ftsW | MSMEG_6929 | MSMEG_4228 | Integral membrane protein MviN, putative; Identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695. | Cell division protein FtsW; Identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; Belongs to the SEDS family. | 0.554 |
| ABK70175.1 | murA | MSMEG_6929 | MSMEG_4932 | Integral membrane protein MviN, putative; Identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.442 |
| ABK70175.1 | murC | MSMEG_6929 | MSMEG_4226 | Integral membrane protein MviN, putative; Identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.493 |
| ABK70175.1 | murG | MSMEG_6929 | MSMEG_4227 | Integral membrane protein MviN, putative; Identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695. | Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.406 |
| ABK70175.1 | pbpA | MSMEG_6929 | MSMEG_0031 | Integral membrane protein MviN, putative; Identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695. | Penicillin binding protein transpeptidase domain protein; Cell wall formation. Plays an important role in cell division and cell shape maintenance by cross-linking adjacent peptidoglycan chains through transpeptidation. | 0.441 |
| ABK70175.1 | pbpB | MSMEG_6929 | MSMEG_4233 | Integral membrane protein MviN, putative; Identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695. | Penicillin binding protein transpeptidase domain protein; Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; Belongs to the transpeptidase family. | 0.660 |
| ABK70175.1 | uppP | MSMEG_6929 | MSMEG_4194 | Integral membrane protein MviN, putative; Identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695. | Undecaprenol kinase, putative; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.412 |
| ABK70175.1 | wag31 | MSMEG_6929 | MSMEG_4217 | Integral membrane protein MviN, putative; Identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695. | DivIVA protein; Important for maintaining cell shape and cell wall integrity by localizing peptidoglycan synthesis to the cell poles. Protects PbpB (PBP3, FtsI) from oxidative stress-induced cleavage. Belongs to the DivIVA family. | 0.514 |
| ABK70570.1 | ABK71878.1 | MSMEG_2436 | MSMEG_2433 | Conserved hypothetical protein; Belongs to the UPF0109 family. | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. | 0.413 |
| ABK70570.1 | ABK73535.1 | MSMEG_2436 | MSMEG_6941 | Conserved hypothetical protein; Belongs to the UPF0109 family. | R3H domain-containing protein; Identified by match to protein family HMM PF01424. | 0.967 |
| ABK71056.1 | ABK70175.1 | MSMEG_0032 | MSMEG_6929 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Integral membrane protein MviN, putative; Identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695. | 0.556 |
| ABK71056.1 | ABK73535.1 | MSMEG_0032 | MSMEG_6941 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | R3H domain-containing protein; Identified by match to protein family HMM PF01424. | 0.430 |
| ABK71056.1 | ABK73973.1 | MSMEG_0032 | MSMEG_2593 | Cell cycle protein, FtsW/RodA/SpoVE family protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Gnat-family protein acetyltransferase; Identified by match to protein family HMM PF00583; match to protein family HMM TIGR03103. | 0.491 |
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