STRINGSTRING
sdhB sdhB sdhC sdhC ABK72366.1 ABK72366.1 ABK75427.1 ABK75427.1 nuoN nuoN nuoM nuoM nuoL nuoL ABK74789.1 ABK74789.1 nuoG nuoG nuoF nuoF nuoC nuoC nuoB nuoB nuoA nuoA etfB etfB etfA etfA ABK75116.1 ABK75116.1 ABK73623.1 ABK73623.1 ABK74983.1 ABK74983.1 cydB cydB trx-2 trx-2 ABK70723.1 ABK70723.1 azoR azoR ABK71128.1 ABK71128.1 ABK71268.1 ABK71268.1 ABK74107.1 ABK74107.1 ABK69740.1 ABK69740.1 ABK75074.1 ABK75074.1 ABK73621.1 ABK73621.1 ABK69679.1 ABK69679.1 ABK74914.1 ABK74914.1 ctaD ctaD ABK71193.1 ABK71193.1 ABK71768.1 ABK71768.1 ABK72066.1 ABK72066.1 ABK71367.1 ABK71367.1 ABK75775.1 ABK75775.1 ABK71096.1 ABK71096.1 ABK72161.1 ABK72161.1 ABK69817.1 ABK69817.1 ABK71726.1 ABK71726.1 narI narI narH narH ABK69904.1 ABK69904.1 ABK75658.1 ABK75658.1 ABK74312.1 ABK74312.1 ABK72454.1 ABK72454.1 ABK72264.1 ABK72264.1 ABK70782.1 ABK70782.1 ABK71051.1 ABK71051.1 ABK73308.1 ABK73308.1 ABK72745.1 ABK72745.1 ABK74648.1 ABK74648.1 ABK71393.1 ABK71393.1 SdhA SdhA ABK73463.1 ABK73463.1 ABK71984.1 ABK71984.1 ABK72030.1 ABK72030.1 ABK72965.1 ABK72965.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sdhBSuccinate dehydrogenase, iron-sulfur protein; Identified by similarity to SP:P51053; match to protein family HMM TIGR00384. (261 aa)
sdhCSuccinate dehydrogenase, cytochrome b556 subunit; Identified by match to protein family HMM PF01127; match to protein family HMM TIGR02970. (138 aa)
ABK72366.1Rubredoxin; Identified by match to protein family HMM PF00301; Belongs to the rubredoxin family. (57 aa)
ABK75427.1Conserved hypothetical protein; Identified by match to protein family HMM PF00462; match to protein family HMM TIGR02200. (82 aa)
nuoNNADH-quinone oxidoreductase, N subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (521 aa)
nuoMNADH-quinone oxidoreductase, M subunit; Identified by similarity to SP:P50974; match to protein family HMM PF00361; match to protein family HMM TIGR01972. (529 aa)
nuoLNADH-quinone oxidoreductase, L subunit; Identified by match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974. (629 aa)
ABK74789.1NADH dehydrogenase subunit j; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (252 aa)
nuoGNADH-quinone oxidoreductase, G subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (794 aa)
nuoFNADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (443 aa)
nuoCNADH-quinone oxidoreductase chain c; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (238 aa)
nuoBNADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (184 aa)
nuoANADH-quinone oxidoreductase, a subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (122 aa)
etfBElectron transfer flavoprotein, beta subunit; Identified by similarity to SP:O85691; match to protein family HMM PF01012. (263 aa)
etfAElectron transfer flavoprotein, alpha subunit; Identified by similarity to SP:P38974; match to protein family HMM PF00766; match to protein family HMM PF01012. (313 aa)
ABK75116.1Conserved domain protein. (63 aa)
ABK73623.1Biotin sulfoxide reductase; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR00509; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (763 aa)
ABK74983.1Conserved hypothetical protein. (239 aa)
cydBCytochrome D ubiquinol oxidase, subunit II; Identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203. (350 aa)
trx-2Thioredoxin; Identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; Belongs to the thioredoxin family. (110 aa)
ABK70723.1Cytochrome D ubiquinol oxidase subunit 1; Identified by match to protein family HMM PF01654. (487 aa)
azoRAcyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. (205 aa)
ABK71128.1Identified by match to protein family HMM PF01292. (192 aa)
ABK71268.1Hypothetical protein; Identified by Glimmer2; putative. (156 aa)
ABK74107.1Conserved domain protein. (83 aa)
ABK69740.1Cytochrome c oxidase subunit 3; Identified by match to protein family HMM PF00510. (203 aa)
ABK75074.1Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034. (268 aa)
ABK73621.1Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. (546 aa)
ABK69679.1Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. (139 aa)
ABK74914.1Cytochrome c oxidase subunit 2; Identified by match to protein family HMM PF00116. (341 aa)
ctaDCytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (583 aa)
ABK71193.1Conserved hypothetical protein. (89 aa)
ABK71768.1Conserved domain protein. (63 aa)
ABK72066.1Respiratory-chain NADH dehydrogenase domain, 51 kda subunit; Identified by match to protein family HMM PF01512. (431 aa)
ABK71367.1Conserved domain protein. (76 aa)
ABK75775.1Conserved domain protein. (66 aa)
ABK71096.1Conserved domain protein. (62 aa)
ABK72161.1Conserved domain protein. (64 aa)
ABK69817.1Conserved hypothetical protein. (152 aa)
ABK71726.1Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (107 aa)
narIRespiratory nitrate reductase, gamma subunit; Identified by match to protein family HMM PF02665; match to protein family HMM TIGR00351. (243 aa)
narHNitrate reductase, beta subunit; Identified by match to protein family HMM TIGR01660. (548 aa)
ABK69904.1Conserved hypothetical protein. (202 aa)
ABK75658.1Conserved hypothetical protein. (487 aa)
ABK74312.1Cytochrome bd ubiquinol oxidase, subunit I; Identified by match to protein family HMM PF01654. (462 aa)
ABK72454.1Cytochrome P450 51. (67 aa)
ABK72264.1Conserved domain protein. (63 aa)
ABK70782.1Cytochrome c oxidase subunit III family protein; Identified by match to protein family HMM PF00510. (191 aa)
ABK71051.1Rieske iron-sulfur protein; Identified by match to protein family HMM PF00355. (138 aa)
ABK73308.1Molybdopterin oxidoreductase; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (720 aa)
ABK72745.1Conserved domain protein. (62 aa)
ABK74648.1Formate dehydrogenase, beta subunit; Identified by similarity to GB:CAA11234.1; match to protein family HMM PF01512. (532 aa)
ABK71393.1Succinate dehydrogenase; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384. (249 aa)
SdhASuccinate dehydrogenase flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM PF07992. (635 aa)
ABK73463.1Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266. (522 aa)
ABK71984.1Conserved domain protein. (64 aa)
ABK72030.1NADH-ubiquinone oxidoreductase/multisubunit na+/h+ antiporter, d subunit; Identified by match to protein family HMM PF00361. (531 aa)
ABK72965.1Putative ferredoxin FdxA; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (114 aa)
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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