STRINGSTRING
ABK71860.1 ABK71860.1 ABK72323.1 ABK72323.1 ABK72652.1 ABK72652.1 ripA ripA ABK72734.1 ABK72734.1 ABK76085.1 ABK76085.1 ABK72792.1 ABK72792.1 ABK70245.1 ABK70245.1 rpfB rpfB ABK75413.1 ABK75413.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABK71860.1N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. (264 aa)
ABK72323.1N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520. (396 aa)
ABK72652.1Gp236 protein. (179 aa)
ripASecreted cell wall-associated hydrolase; Peptidoglycan endopeptidase that cleaves the bond between D- glutamate and meso-diaminopimelate. Binds and degrades high-molecular weight peptidoglycan. Required for normal separation of daughter cells after cell division and for cell wall integrity (By similarity). (497 aa)
ABK72734.1Conserved hypothetical protein. (216 aa)
ABK76085.1Secreted protein. (433 aa)
ABK72792.1Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510. (275 aa)
ABK70245.1LpqU protein. (224 aa)
rpfBResuscitation-promoting factor RpfB; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). Belongs to the transglycosylase family. Rpf subfamily. (375 aa)
ABK75413.1N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510. (536 aa)
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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