7 items (Mycolicibacterium smegmatis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABK70723.1	Cytochrome D ubiquinol oxidase subunit 1; Identified by match to protein family HMM PF01654. (487 aa)
	ABK73621.1	Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. (546 aa)
	ABK74312.1	Cytochrome bd ubiquinol oxidase, subunit I; Identified by match to protein family HMM PF01654. (462 aa)
	ABK71051.1	Rieske iron-sulfur protein; Identified by match to protein family HMM PF00355. (138 aa)
	cydB	Cytochrome D ubiquinol oxidase, subunit II; Identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203. (350 aa)
	ABK73463.1	Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266. (522 aa)
	ABK75074.1	Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034. (268 aa)

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK70723.1	ABK74312.1	MSMEG_3233	MSMEG_5605	Cytochrome D ubiquinol oxidase subunit 1; Identified by match to protein family HMM PF01654.	Cytochrome bd ubiquinol oxidase, subunit I; Identified by match to protein family HMM PF01654.	0.928
ABK70723.1	cydB	MSMEG_3233	MSMEG_3232	Cytochrome D ubiquinol oxidase subunit 1; Identified by match to protein family HMM PF01654.	Cytochrome D ubiquinol oxidase, subunit II; Identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203.	0.999
ABK71051.1	ABK73621.1	MSMEG_6548	MSMEG_4263	Rieske iron-sulfur protein; Identified by match to protein family HMM PF00355.	Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033.	0.968
ABK71051.1	ABK75074.1	MSMEG_6548	MSMEG_4261	Rieske iron-sulfur protein; Identified by match to protein family HMM PF00355.	Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034.	0.912
ABK73463.1	ABK73621.1	MSMEG_0637	MSMEG_4263	Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266.	Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033.	0.971
ABK73463.1	ABK75074.1	MSMEG_0637	MSMEG_4261	Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266.	Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034.	0.920
ABK73621.1	ABK71051.1	MSMEG_4263	MSMEG_6548	Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033.	Rieske iron-sulfur protein; Identified by match to protein family HMM PF00355.	0.968
ABK73621.1	ABK73463.1	MSMEG_4263	MSMEG_0637	Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033.	Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266.	0.971
ABK73621.1	ABK75074.1	MSMEG_4263	MSMEG_4261	Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033.	Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034.	0.999
ABK73621.1	cydB	MSMEG_4263	MSMEG_3232	Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033.	Cytochrome D ubiquinol oxidase, subunit II; Identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203.	0.717
ABK74312.1	ABK70723.1	MSMEG_5605	MSMEG_3233	Cytochrome bd ubiquinol oxidase, subunit I; Identified by match to protein family HMM PF01654.	Cytochrome D ubiquinol oxidase subunit 1; Identified by match to protein family HMM PF01654.	0.928
ABK74312.1	cydB	MSMEG_5605	MSMEG_3232	Cytochrome bd ubiquinol oxidase, subunit I; Identified by match to protein family HMM PF01654.	Cytochrome D ubiquinol oxidase, subunit II; Identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203.	0.995
ABK75074.1	ABK71051.1	MSMEG_4261	MSMEG_6548	Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034.	Rieske iron-sulfur protein; Identified by match to protein family HMM PF00355.	0.912
ABK75074.1	ABK73463.1	MSMEG_4261	MSMEG_0637	Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034.	Iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266.	0.920
ABK75074.1	ABK73621.1	MSMEG_4261	MSMEG_4263	Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034.	Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033.	0.999
cydB	ABK70723.1	MSMEG_3232	MSMEG_3233	Cytochrome D ubiquinol oxidase, subunit II; Identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203.	Cytochrome D ubiquinol oxidase subunit 1; Identified by match to protein family HMM PF01654.	0.999
cydB	ABK73621.1	MSMEG_3232	MSMEG_4263	Cytochrome D ubiquinol oxidase, subunit II; Identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203.	Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033.	0.717
cydB	ABK74312.1	MSMEG_3232	MSMEG_5605	Cytochrome D ubiquinol oxidase, subunit II; Identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203.	Cytochrome bd ubiquinol oxidase, subunit I; Identified by match to protein family HMM PF01654.	0.995