Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71308.1 | ABK72066.1 | MSMEG_2059 | MSMEG_4812 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | Respiratory-chain NADH dehydrogenase domain, 51 kda subunit; Identified by match to protein family HMM PF01512. | 0.990 |
| ABK71308.1 | ABK73621.1 | MSMEG_2059 | MSMEG_4263 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | 0.898 |
| ABK71308.1 | ABK74648.1 | MSMEG_2059 | MSMEG_0160 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | Formate dehydrogenase, beta subunit; Identified by similarity to GB:CAA11234.1; match to protein family HMM PF01512. | 0.992 |
| ABK71308.1 | ABK74914.1 | MSMEG_2059 | MSMEG_4268 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | Cytochrome c oxidase subunit 2; Identified by match to protein family HMM PF00116. | 0.753 |
| ABK71308.1 | ABK75074.1 | MSMEG_2059 | MSMEG_4261 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034. | 0.664 |
| ABK71308.1 | ctaD | MSMEG_2059 | MSMEG_4437 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.898 |
| ABK71308.1 | nuoF | MSMEG_2059 | MSMEG_2058 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.999 |
| ABK71308.1 | nuoG | MSMEG_2059 | MSMEG_2057 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | NADH-quinone oxidoreductase, G subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.999 |
| ABK71308.1 | nuoM | MSMEG_2059 | MSMEG_2051 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | NADH-quinone oxidoreductase, M subunit; Identified by similarity to SP:P50974; match to protein family HMM PF00361; match to protein family HMM TIGR01972. | 0.999 |
| ABK71308.1 | sdhC | MSMEG_2059 | MSMEG_1672 | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | Succinate dehydrogenase, cytochrome b556 subunit; Identified by match to protein family HMM PF01127; match to protein family HMM TIGR02970. | 0.809 |
| ABK72066.1 | ABK71308.1 | MSMEG_4812 | MSMEG_2059 | Respiratory-chain NADH dehydrogenase domain, 51 kda subunit; Identified by match to protein family HMM PF01512. | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | 0.990 |
| ABK72066.1 | ABK73621.1 | MSMEG_4812 | MSMEG_4263 | Respiratory-chain NADH dehydrogenase domain, 51 kda subunit; Identified by match to protein family HMM PF01512. | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | 0.755 |
| ABK72066.1 | ABK74914.1 | MSMEG_4812 | MSMEG_4268 | Respiratory-chain NADH dehydrogenase domain, 51 kda subunit; Identified by match to protein family HMM PF01512. | Cytochrome c oxidase subunit 2; Identified by match to protein family HMM PF00116. | 0.505 |
| ABK72066.1 | ABK75546.1 | MSMEG_4812 | MSMEG_0159 | Respiratory-chain NADH dehydrogenase domain, 51 kda subunit; Identified by match to protein family HMM PF01512. | Formate dehydrogenase, gamma subunit; Identified by similarity to GB:CAA11233.1; match to protein family HMM PF01257. | 0.989 |
| ABK72066.1 | ctaD | MSMEG_4812 | MSMEG_4437 | Respiratory-chain NADH dehydrogenase domain, 51 kda subunit; Identified by match to protein family HMM PF01512. | Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.756 |
| ABK72066.1 | nuoG | MSMEG_4812 | MSMEG_2057 | Respiratory-chain NADH dehydrogenase domain, 51 kda subunit; Identified by match to protein family HMM PF01512. | NADH-quinone oxidoreductase, G subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.991 |
| ABK72066.1 | nuoM | MSMEG_4812 | MSMEG_2051 | Respiratory-chain NADH dehydrogenase domain, 51 kda subunit; Identified by match to protein family HMM PF01512. | NADH-quinone oxidoreductase, M subunit; Identified by similarity to SP:P50974; match to protein family HMM PF00361; match to protein family HMM TIGR01972. | 0.961 |
| ABK72066.1 | sdhC | MSMEG_4812 | MSMEG_1672 | Respiratory-chain NADH dehydrogenase domain, 51 kda subunit; Identified by match to protein family HMM PF01512. | Succinate dehydrogenase, cytochrome b556 subunit; Identified by match to protein family HMM PF01127; match to protein family HMM TIGR02970. | 0.509 |
| ABK73621.1 | ABK71308.1 | MSMEG_4263 | MSMEG_2059 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | NADH-quinone oxidoreductase chain e; Identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958. | 0.898 |
| ABK73621.1 | ABK72066.1 | MSMEG_4263 | MSMEG_4812 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Identified by match to protein family HMM PF00033. | Respiratory-chain NADH dehydrogenase domain, 51 kda subunit; Identified by match to protein family HMM PF01512. | 0.755 |
page 1 of 6