(21 nodes) Capsule network (Mycolicibacterium smegmatis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABK75774.1	Conserved hypothetical proline rich protein. (616 aa)
	groL	Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (541 aa)
	ABK73428.1	Conserved hypothetical protein. (368 aa)
	ABK72008.1	Putative carboxylesterase/lipase; Identified by match to protein family HMM PF07859. (307 aa)
	ABK72867.1	Conserved hypothetical proline rich protein. (592 aa)
	ABK70636.1	Lipase; Identified by match to protein family HMM PF07859. (308 aa)
	ABK75037.1	Esterase; Identified by match to protein family HMM PF07859. (314 aa)
	glcB	Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. (721 aa)
	ABK72355.1	Esterase; Identified by match to protein family HMM PF07859. (295 aa)
	ABK69867.1	Lipase; Identified by match to protein family HMM PF07859. (316 aa)
	ABK71295.1	Esterase; Identified by match to protein family HMM PF07859. (326 aa)
	ABK74540.1	LipW protein; Identified by match to protein family HMM PF07859. (310 aa)
	ABK70831.1	Alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF07859. (350 aa)
	groL-3	Chaperonin GroL; Plays an essential role in the productive folding of MimA and MimC, and thus in the formation of the active MimABCD complex. Belongs to the chaperonin (HSP60) family. (549 aa)
	ABK75813.1	Alpha/beta hydrolase fold; Identified by match to protein family HMM PF07859. (299 aa)
	ABK70226.1	Alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF07859. (366 aa)
	groL-2	Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (540 aa)
	ABK70602.1	Peptidase, S9A/B/C families; Identified by match to protein family HMM PF00326; match to protein family HMM PF07859. (403 aa)
	ABK71946.1	Conserved hypothetical proline and threonine rich protein. (643 aa)
	ABK70539.1	Conserved hypothetical protein. (595 aa)
	dnaK	Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. (622 aa)

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK69867.1	ABK70602.1	MSMEG_2888	MSMEG_0302	Lipase; Identified by match to protein family HMM PF07859.	Peptidase, S9A/B/C families; Identified by match to protein family HMM PF00326; match to protein family HMM PF07859.	0.538
ABK70226.1	ABK70831.1	MSMEG_0289	MSMEG_2409	Alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF07859.	Alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF07859.	0.694
ABK70226.1	ABK72008.1	MSMEG_0289	MSMEG_6852	Alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF07859.	Putative carboxylesterase/lipase; Identified by match to protein family HMM PF07859.	0.599
ABK70226.1	ABK75813.1	MSMEG_0289	MSMEG_0280	Alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF07859.	Alpha/beta hydrolase fold; Identified by match to protein family HMM PF07859.	0.723
ABK70539.1	groL	MSMEG_0692	MSMEG_0880	Conserved hypothetical protein.	Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.	0.726
ABK70539.1	groL-2	MSMEG_0692	MSMEG_1583	Conserved hypothetical protein.	Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.	0.723
ABK70539.1	groL-3	MSMEG_0692	MSMEG_1978	Conserved hypothetical protein.	Chaperonin GroL; Plays an essential role in the productive folding of MimA and MimC, and thus in the formation of the active MimABCD complex. Belongs to the chaperonin (HSP60) family.	0.727
ABK70602.1	ABK69867.1	MSMEG_0302	MSMEG_2888	Peptidase, S9A/B/C families; Identified by match to protein family HMM PF00326; match to protein family HMM PF07859.	Lipase; Identified by match to protein family HMM PF07859.	0.538
ABK70602.1	ABK70636.1	MSMEG_0302	MSMEG_4148	Peptidase, S9A/B/C families; Identified by match to protein family HMM PF00326; match to protein family HMM PF07859.	Lipase; Identified by match to protein family HMM PF07859.	0.555
ABK70602.1	ABK70831.1	MSMEG_0302	MSMEG_2409	Peptidase, S9A/B/C families; Identified by match to protein family HMM PF00326; match to protein family HMM PF07859.	Alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF07859.	0.570
ABK70602.1	ABK72008.1	MSMEG_0302	MSMEG_6852	Peptidase, S9A/B/C families; Identified by match to protein family HMM PF00326; match to protein family HMM PF07859.	Putative carboxylesterase/lipase; Identified by match to protein family HMM PF07859.	0.403
ABK70602.1	ABK75813.1	MSMEG_0302	MSMEG_0280	Peptidase, S9A/B/C families; Identified by match to protein family HMM PF00326; match to protein family HMM PF07859.	Alpha/beta hydrolase fold; Identified by match to protein family HMM PF07859.	0.633
ABK70636.1	ABK70602.1	MSMEG_4148	MSMEG_0302	Lipase; Identified by match to protein family HMM PF07859.	Peptidase, S9A/B/C families; Identified by match to protein family HMM PF00326; match to protein family HMM PF07859.	0.555
ABK70831.1	ABK70226.1	MSMEG_2409	MSMEG_0289	Alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF07859.	Alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF07859.	0.694
ABK70831.1	ABK70602.1	MSMEG_2409	MSMEG_0302	Alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF07859.	Peptidase, S9A/B/C families; Identified by match to protein family HMM PF00326; match to protein family HMM PF07859.	0.570
ABK71946.1	groL	MSMEG_0638	MSMEG_0880	Conserved hypothetical proline and threonine rich protein.	Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.	0.723
ABK71946.1	groL-2	MSMEG_0638	MSMEG_1583	Conserved hypothetical proline and threonine rich protein.	Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.	0.756
ABK71946.1	groL-3	MSMEG_0638	MSMEG_1978	Conserved hypothetical proline and threonine rich protein.	Chaperonin GroL; Plays an essential role in the productive folding of MimA and MimC, and thus in the formation of the active MimABCD complex. Belongs to the chaperonin (HSP60) family.	0.727
ABK72008.1	ABK70226.1	MSMEG_6852	MSMEG_0289	Putative carboxylesterase/lipase; Identified by match to protein family HMM PF07859.	Alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF07859.	0.599
ABK72008.1	ABK70602.1	MSMEG_6852	MSMEG_0302	Putative carboxylesterase/lipase; Identified by match to protein family HMM PF07859.	Peptidase, S9A/B/C families; Identified by match to protein family HMM PF00326; match to protein family HMM PF07859.	0.403