29 items (Mycolicibacterium smegmatis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABK73128.1	[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799. (168 aa)
	ABK74307.1	Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. (358 aa)
	ABK71393.1	Succinate dehydrogenase; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384. (249 aa)
	ABK71441.1	Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799. (173 aa)
	ABK71192.1	[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799. (158 aa)
	thiS	Thiamine biosynthesis protein ThiS; Identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683. (66 aa)
	ABK72521.1	Twin-arginine translocation pathway signal; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799. (205 aa)
	ABK72488.1	Putative oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF01315; match to protein family HMM PF01799; match to protein family HMM PF02738. (893 aa)
	sdhB	Succinate dehydrogenase, iron-sulfur protein; Identified by similarity to SP:P51053; match to protein family HMM TIGR00384. (261 aa)
	ABK74076.1	Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. (363 aa)
	ABK74765.1	2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. (383 aa)
	ABK72679.1	Toluate 1,2-dioxygenase electron transfer component; Identified by match to protein family HMM PF00106; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF07729; match to protein family HMM PF08021. (920 aa)
	mimB	Methane monooxygenase component C; Reductase component of the propane 2-monooxygenase multicomponent enzyme system which is involved in the degradation of propane via the O2-dependent hydroxylation of propane. Reductase catalyzes the transfer of electrons from NADH or NADPH to monooxygenase (Probable). (348 aa)
	ABK73837.1	Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. (332 aa)
	ABK72155.1	Oxidoreductase, NAD/FAD-binding; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. (351 aa)
	ABK70053.1	[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799. (161 aa)
	relA	GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (797 aa)
	ABK70806.1	Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. (369 aa)
	ABK76062.1	Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111. (107 aa)
	ABK69966.1	Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. (317 aa)
	ABK72935.1	Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. (315 aa)
	ABK73254.1	Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. (313 aa)
	ABK70387.1	2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111. (137 aa)
	ABK74504.1	Identified by match to protein family HMM PF02597. (93 aa)
	ychF	GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (368 aa)
	ABK75127.1	Identified by match to protein family HMM PF02597. (80 aa)
	ABK73876.1	[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799. (170 aa)
	kshB	Oxidoreductase, electron transfer component; Involved in the degradation of cholesterol. Catalyzes the introduction of a 9a-hydroxyl moiety into 1,4-androstadiene-3,17-dione (ADD) to yield the 9alpha-hydroxy-1,4-androstadiene-3,17-dione (9OHADD) intermediate which spontaneously form 3-hydroxy-9,10-seconandrost- 1,3,5(10)-triene-9,17-dione (HSA) via the meta-cleavage of ring B with concomitant aromatization of ring A. (353 aa)
	ABK75634.1	Putative oxidoreductase; Identified by match to protein family HMM PF00111. (136 aa)

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK69966.1	ABK70387.1	MSMEG_4152	MSMEG_4878	Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.	2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111.	0.403
ABK69966.1	ABK72679.1	MSMEG_4152	MSMEG_1906	Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.	Toluate 1,2-dioxygenase electron transfer component; Identified by match to protein family HMM PF00106; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF07729; match to protein family HMM PF08021.	0.617
ABK69966.1	ABK74076.1	MSMEG_4152	MSMEG_1742	Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.	Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.	0.608
ABK69966.1	ABK76062.1	MSMEG_4152	MSMEG_4009	Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.	Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111.	0.677
ABK70053.1	ABK72488.1	MSMEG_2951	MSMEG_1291	[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.	Putative oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF01315; match to protein family HMM PF01799; match to protein family HMM PF02738.	0.677
ABK70387.1	ABK69966.1	MSMEG_4878	MSMEG_4152	2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111.	Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.	0.403
ABK70387.1	ABK72679.1	MSMEG_4878	MSMEG_1906	2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111.	Toluate 1,2-dioxygenase electron transfer component; Identified by match to protein family HMM PF00106; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF07729; match to protein family HMM PF08021.	0.469
ABK70387.1	ABK72935.1	MSMEG_4878	MSMEG_4371	2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111.	Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.	0.548
ABK70387.1	ABK73254.1	MSMEG_4878	MSMEG_4638	2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111.	Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.	0.434
ABK70387.1	ABK73837.1	MSMEG_4878	MSMEG_1989	2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111.	Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.	0.494
ABK70387.1	ABK74076.1	MSMEG_4878	MSMEG_1742	2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111.	Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.	0.456
ABK70387.1	ABK74765.1	MSMEG_4878	MSMEG_1885	2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111.	2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.	0.491
ABK70387.1	ABK76062.1	MSMEG_4878	MSMEG_4009	2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111.	Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111.	0.647
ABK70806.1	ABK72679.1	MSMEG_3676	MSMEG_1906	Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.	Toluate 1,2-dioxygenase electron transfer component; Identified by match to protein family HMM PF00106; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF07729; match to protein family HMM PF08021.	0.619
ABK70806.1	ABK76062.1	MSMEG_3676	MSMEG_4009	Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.	Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111.	0.722
ABK71192.1	ABK72488.1	MSMEG_0745	MSMEG_1291	[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.	Putative oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF01315; match to protein family HMM PF01799; match to protein family HMM PF02738.	0.677
ABK71393.1	ABK72679.1	MSMEG_0417	MSMEG_1906	Succinate dehydrogenase; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384.	Toluate 1,2-dioxygenase electron transfer component; Identified by match to protein family HMM PF00106; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF07729; match to protein family HMM PF08021.	0.413
ABK71393.1	sdhB	MSMEG_0417	MSMEG_1669	Succinate dehydrogenase; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384.	Succinate dehydrogenase, iron-sulfur protein; Identified by similarity to SP:P51053; match to protein family HMM TIGR00384.	0.923
ABK71441.1	ABK72488.1	MSMEG_0686	MSMEG_1291	Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.	Putative oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF01315; match to protein family HMM PF01799; match to protein family HMM PF02738.	0.683
ABK71441.1	ABK72521.1	MSMEG_0686	MSMEG_0872	Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.	Twin-arginine translocation pathway signal; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.	0.907