Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71916.1 | ABK72040.1 | MSMEG_5998 | MSMEG_3358 | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | YaeQ protein; Identified by match to protein family HMM PF07152. | 0.513 |
| ABK71916.1 | FbiC | MSMEG_5998 | MSMEG_5126 | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | FO synthase; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423. | 0.876 |
| ABK71916.1 | fgd | MSMEG_5998 | MSMEG_0777 | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone. Appears to have a role in resistance to oxidative stress, via its consumption of G6P that serves as a source of reducing power to combat oxidative stress in mycobacteria. Cannot use NAD, NADP, FAD or FMN instead of coenzyme F420 as an electron acceptor. Exhibits nearly no activity with D-mannose-6- phosphate or D-fructose-6-phosphate as substrate. Belongs to the F420-dependent glucose-6-phosphate dehydrogenase family. | 0.987 |
| ABK71916.1 | pdxH | MSMEG_5998 | MSMEG_5675 | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.634 |
| ABK72040.1 | ABK71916.1 | MSMEG_3358 | MSMEG_5998 | YaeQ protein; Identified by match to protein family HMM PF07152. | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.513 |
| FbiC | ABK71916.1 | MSMEG_5126 | MSMEG_5998 | FO synthase; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423. | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.876 |
| FbiC | fgd | MSMEG_5126 | MSMEG_0777 | FO synthase; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423. | F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone. Appears to have a role in resistance to oxidative stress, via its consumption of G6P that serves as a source of reducing power to combat oxidative stress in mycobacteria. Cannot use NAD, NADP, FAD or FMN instead of coenzyme F420 as an electron acceptor. Exhibits nearly no activity with D-mannose-6- phosphate or D-fructose-6-phosphate as substrate. Belongs to the F420-dependent glucose-6-phosphate dehydrogenase family. | 0.970 |
| fgd | ABK71916.1 | MSMEG_0777 | MSMEG_5998 | F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone. Appears to have a role in resistance to oxidative stress, via its consumption of G6P that serves as a source of reducing power to combat oxidative stress in mycobacteria. Cannot use NAD, NADP, FAD or FMN instead of coenzyme F420 as an electron acceptor. Exhibits nearly no activity with D-mannose-6- phosphate or D-fructose-6-phosphate as substrate. Belongs to the F420-dependent glucose-6-phosphate dehydrogenase family. | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.987 |
| fgd | FbiC | MSMEG_0777 | MSMEG_5126 | F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone. Appears to have a role in resistance to oxidative stress, via its consumption of G6P that serves as a source of reducing power to combat oxidative stress in mycobacteria. Cannot use NAD, NADP, FAD or FMN instead of coenzyme F420 as an electron acceptor. Exhibits nearly no activity with D-mannose-6- phosphate or D-fructose-6-phosphate as substrate. Belongs to the F420-dependent glucose-6-phosphate dehydrogenase family. | FO synthase; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423. | 0.970 |
| fgd | pdxH | MSMEG_0777 | MSMEG_5675 | F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone. Appears to have a role in resistance to oxidative stress, via its consumption of G6P that serves as a source of reducing power to combat oxidative stress in mycobacteria. Cannot use NAD, NADP, FAD or FMN instead of coenzyme F420 as an electron acceptor. Exhibits nearly no activity with D-mannose-6- phosphate or D-fructose-6-phosphate as substrate. Belongs to the F420-dependent glucose-6-phosphate dehydrogenase family. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.897 |
| pdxH | ABK71916.1 | MSMEG_5675 | MSMEG_5998 | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.634 |
| pdxH | fgd | MSMEG_5675 | MSMEG_0777 | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone. Appears to have a role in resistance to oxidative stress, via its consumption of G6P that serves as a source of reducing power to combat oxidative stress in mycobacteria. Cannot use NAD, NADP, FAD or FMN instead of coenzyme F420 as an electron acceptor. Exhibits nearly no activity with D-mannose-6- phosphate or D-fructose-6-phosphate as substrate. Belongs to the F420-dependent glucose-6-phosphate dehydrogenase family. | 0.897 |