Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69584.1 | ABK69616.1 | MSMEG_0217 | MSMEG_5866 | Alcohol dehydrogenase B; Identified by match to protein family HMM PF00107. | Alcohol dehydrogenase B; Identified by match to protein family HMM PF00107. | 0.903 |
| ABK69584.1 | ABK73839.1 | MSMEG_0217 | MSMEG_6242 | Alcohol dehydrogenase B; Identified by match to protein family HMM PF00107. | Alcohol dehydrogenase, iron-containing; Identified by match to protein family HMM PF00465. | 0.939 |
| ABK69616.1 | ABK69584.1 | MSMEG_5866 | MSMEG_0217 | Alcohol dehydrogenase B; Identified by match to protein family HMM PF00107. | Alcohol dehydrogenase B; Identified by match to protein family HMM PF00107. | 0.903 |
| ABK69616.1 | ABK73839.1 | MSMEG_5866 | MSMEG_6242 | Alcohol dehydrogenase B; Identified by match to protein family HMM PF00107. | Alcohol dehydrogenase, iron-containing; Identified by match to protein family HMM PF00465. | 0.963 |
| ABK69733.1 | ABK73120.1 | MSMEG_0162 | MSMEG_0161 | NAD-dependent formate dehydrogenase delta subunit. | Formate dehydrogenase, alpha subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01591. | 0.998 |
| ABK69733.1 | ABK73839.1 | MSMEG_0162 | MSMEG_6242 | NAD-dependent formate dehydrogenase delta subunit. | Alcohol dehydrogenase, iron-containing; Identified by match to protein family HMM PF00465. | 0.901 |
| ABK69733.1 | ABK74447.1 | MSMEG_0162 | MSMEG_1847 | NAD-dependent formate dehydrogenase delta subunit. | 4Fe-4S ferredoxin, iron-sulfur binding protein; Identified by match to protein family HMM PF00037. | 0.905 |
| ABK69733.1 | ABK74648.1 | MSMEG_0162 | MSMEG_0160 | NAD-dependent formate dehydrogenase delta subunit. | Formate dehydrogenase, beta subunit; Identified by similarity to GB:CAA11234.1; match to protein family HMM PF01512. | 0.994 |
| ABK69733.1 | ABK75546.1 | MSMEG_0162 | MSMEG_0159 | NAD-dependent formate dehydrogenase delta subunit. | Formate dehydrogenase, gamma subunit; Identified by similarity to GB:CAA11233.1; match to protein family HMM PF01257. | 0.994 |
| ABK69733.1 | ppc | MSMEG_0162 | MSMEG_3097 | NAD-dependent formate dehydrogenase delta subunit. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.802 |
| ABK70572.1 | ABK73360.1 | MSMEG_6338 | MSMEG_3507 | Phosphoglycerate mutase family protein, putative; Identified by match to protein family HMM PF00300. | Fructose-bisphosphate aldolase class-I; Identified by match to protein family HMM PF00274. | 0.820 |
| ABK70572.1 | ABK73984.1 | MSMEG_6338 | MSMEG_1375 | Phosphoglycerate mutase family protein, putative; Identified by match to protein family HMM PF00300. | Tagatose-1,6-bisphosphate aldolase GatY; Identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167. | 0.819 |
| ABK70572.1 | eno | MSMEG_6338 | MSMEG_5415 | Phosphoglycerate mutase family protein, putative; Identified by match to protein family HMM PF00300. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.911 |
| ABK70572.1 | fbaA | MSMEG_6338 | MSMEG_0752 | Phosphoglycerate mutase family protein, putative; Identified by match to protein family HMM PF00300. | Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.817 |
| ABK70572.1 | gpmA | MSMEG_6338 | MSMEG_0935 | Phosphoglycerate mutase family protein, putative; Identified by match to protein family HMM PF00300. | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.922 |
| ABK70572.1 | serA | MSMEG_6338 | MSMEG_2378 | Phosphoglycerate mutase family protein, putative; Identified by match to protein family HMM PF00300. | D-3-phosphoglycerate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF01842; match to protein family HMM PF02826; match to protein family HMM TIGR01327; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.910 |
| ABK70857.1 | ABK72224.1 | MSMEG_2103 | MSMEG_2456 | 5,10-methylenetetrahydromethanopterin reductase. | 5,10-methylenetetrahydromethanopterin reductase; Identified by match to protein family HMM PF00296. | 0.930 |
| ABK70857.1 | ABK72595.1 | MSMEG_2103 | MSMEG_3445 | 5,10-methylenetetrahydromethanopterin reductase. | 5,10-methylenetetrahydromethanopterin reductase; Identified by match to protein family HMM PF00296. | 0.962 |
| ABK70857.1 | cofD | MSMEG_2103 | MSMEG_1830 | 5,10-methylenetetrahydromethanopterin reductase. | Lppg:fo 2-phospho-l-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. | 0.782 |
| ABK70857.1 | fbiB | MSMEG_2103 | MSMEG_1829 | 5,10-methylenetetrahydromethanopterin reductase. | F420-0:gamma-glutamyl ligase; Bifunctional enzyme that catalyzes the GTP-dependent successive addition of two or more gamma-linked L-glutamates to the L- lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives, and the FMNH2- dependent reduction of dehydro-F420-0 to form F420-0. Is able to add up to six glutamates to F420-0, producing F420-3 as the major product with lesser amount of F420-4,5,6, consistent with it producing the polyglutamated F420 compounds present in Mycobacterium smegmatis. In the N-terminal section; belong [...] | 0.733 |
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