STRINGSTRING
pilT pilT MXAN_1090 MXAN_1090 pilT-2 pilT-2 MXAN_2332 MXAN_2332 MXAN_2501 MXAN_2501 MXAN_2502 MXAN_2502 MXAN_2503 MXAN_2503 MXAN_2504 MXAN_2504 MXAN_2505 MXAN_2505 MXAN_2506 MXAN_2506 MXAN_2507 MXAN_2507 MXAN_2508 MXAN_2508 MXAN_2509 MXAN_2509 gspG gspG MXAN_2511 MXAN_2511 gspF gspF gspE gspE gspD gspD gspC gspC MXAN_2658 MXAN_2658 MXAN_2924 MXAN_2924 MXAN_3001 MXAN_3001 gspG-2 gspG-2 MXAN_3836 MXAN_3836 MXAN_4436 MXAN_4436 MXAN_5497 MXAN_5497 MXAN_5771 MXAN_5771 pilQ pilQ MXAN_5773 MXAN_5773 pilO pilO pilN pilN pilM pilM pilR2 pilR2 pilS2 pilS2 gspO gspO pilI pilI pilH pilH pilG pilG pilA pilA pilC pilC pilT-3 pilT-3 pilB pilB MXAN_6863 MXAN_6863 MXAN_7176 MXAN_7176 MXAN_7500 MXAN_7500
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pilTTwitching mobility protein; Identified by similarity to SP:P24559; match to protein family HMM PF00437; match to protein family HMM TIGR01420. (364 aa)
MXAN_1090General secretory system II protein E, N-terminal domain protein; Identified by match to protein family HMM PF05157. (280 aa)
pilT-2Twitching mobility protein; Identified by similarity to SP:P24559; match to protein family HMM PF00437; match to protein family HMM TIGR01420. (491 aa)
MXAN_2332Hypothetical protein; Identified by Glimmer2; putative. (290 aa)
MXAN_2501Sigma-54 dependent transcriptional regulator, Fis family; Identified by match to protein family HMM PF00158; match to protein family HMM PF00498; match to protein family HMM PF02954; match to protein family HMM TIGR01199. (546 aa)
MXAN_2502Hypothetical protein; Identified by Glimmer2; putative. (322 aa)
MXAN_2503Hypothetical protein; Identified by Glimmer2; putative. (185 aa)
MXAN_2504Putative general secretion pathway protein L. (533 aa)
MXAN_2505Putative general secretory pathway protein K. (455 aa)
MXAN_2506Putative general secretion pathway protein J; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. (224 aa)
MXAN_2507Type II secretion operon protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. (289 aa)
MXAN_2508Prepilin-type N-terminal cleavage/methylation domain protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. (244 aa)
MXAN_2509Conserved hypothetical protein. (151 aa)
gspGGeneral secretion pathway protein G; Identified by similarity to GB:AAD05177.1; match to protein family HMM PF07963; match to protein family HMM TIGR01710; match to protein family HMM TIGR02532. (141 aa)
MXAN_2511Hypothetical protein; Identified by Glimmer2; putative. (56 aa)
gspFGeneral secretion pathway protein F; Identified by similarity to GB:AAD05175.1; match to protein family HMM PF00482; match to protein family HMM TIGR02120. (418 aa)
gspEGeneral secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (605 aa)
gspDGeneral secretion pathway protein D; Identified by similarity to GB:AAD05173.1; match to protein family HMM PF00263; match to protein family HMM PF03958; match to protein family HMM TIGR02517. (863 aa)
gspCGeneral secretion pathway protein C. (314 aa)
MXAN_2658Type II/IV secretion system protein; Identified by match to protein family HMM PF00437; match to protein family HMM PF05157. (615 aa)
MXAN_2924General secretory system II protein E, N-terminal domain protein; Identified by match to protein family HMM PF05157. (2136 aa)
MXAN_3001LysM domain protein; Identified by match to protein family HMM PF01476. (411 aa)
gspG-2General secretion pathway protein G; Identified by similarity to GB:AAD05177.1; match to protein family HMM PF07963; match to protein family HMM TIGR01710; match to protein family HMM TIGR02532. (150 aa)
MXAN_3836General secretory system II protein E, N-terminal domain protein; Identified by match to protein family HMM PF05157. (308 aa)
MXAN_4436General secretory system II protein E, N-terminal domain protein; Identified by match to protein family HMM PF05157. (431 aa)
MXAN_5497General secretion pathway protein E, N-terminal domain protein; Identified by match to protein family HMM PF05157. (293 aa)
MXAN_5771Putative lipoprotein. (230 aa)
pilQType IV pilus secretin PilQ; Identified by similarity to GB:AAD04923.1; match to protein family HMM PF00263; match to protein family HMM PF03958; match to protein family HMM PF07660; match to protein family HMM TIGR02515. (901 aa)
MXAN_5773Putative lipoprotein. (200 aa)
pilOType IV pilus biogenesis protein PilO; Identified by similarity to GB:AAA87404.1. (205 aa)
pilNType IV pilus biogenesis protein PilN; Identified by similarity to GB:AAA87403.1; match to protein family HMM PF05137. (225 aa)
pilMType IV pilus biogenesis protein PilM; Identified by similarity to PIR:S77726; match to protein family HMM TIGR01175. (395 aa)
pilR2Sigma-54 dependent DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199. (474 aa)
pilS2Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518. (373 aa)
gspOPrepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (335 aa)
pilIPutative efflux ABC transporter, permease protein PilI; Identified by similarity to GB:AAC36156.1. (255 aa)
pilHEfflux ABC transporter, ATP-binding protein PilH; Identified by similarity to SP:P19844; similarity to GB:AAC36155.1; match to protein family HMM PF00005. (326 aa)
pilGPutative efflux ABC transporter accessory factor PilG; Identified by similarity to GB:AAC36154.1. (331 aa)
pilAPilin; Makes up the pili which are long filamentous (less than 10 nm thick and up to 10 um long) polarly located appendages. They are required for social (S) motility; Belongs to the N-Me-Phe pilin family. (220 aa)
pilCType 4 fimbrial assembly protein PilC; Identified by similarity to GB:AAA25733.1; similarity to GB:AAT00616.1; match to protein family HMM PF00482. (417 aa)
pilT-3Twitching motility protein PilT; Identified by similarity to SP:P24559; match to protein family HMM PF00437; match to protein family HMM TIGR01420. (372 aa)
pilBType IV-A pilus assembly ATPase PilB; Identified by match to protein family HMM PF00437; match to protein family HMM PF05157; match to protein family HMM TIGR02538. (566 aa)
MXAN_6863General secretion protein E N-terminal domain protein; Identified by match to protein family HMM PF05157. (296 aa)
MXAN_7176Type II secretion system protein, GspE family; Identified by similarity to GB:AAD05174.1; match to protein family HMM PF00437. (515 aa)
MXAN_7500GspE N-terminal domain protein; Identified by similarity to GB:AAT00614.1; match to protein family HMM PF05157. (413 aa)
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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