Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SPO1180 | SPO1181 | SPO1180 | SPO1181 | Hypothetical protein; Identified by similarity to GB:BAB48908.1. | Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717. | 0.870 |
| SPO1180 | ftsQ | SPO1180 | SPO1202 | Hypothetical protein; Identified by similarity to GB:BAB48908.1. | Cell division protein ftsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.627 |
| SPO1180 | mraW | SPO1180 | SPO1179 | Hypothetical protein; Identified by similarity to GB:BAB48908.1. | S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.878 |
| SPO1180 | mraY | SPO1180 | SPO1184 | Hypothetical protein; Identified by similarity to GB:BAB48908.1. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.807 |
| SPO1180 | mraZ | SPO1180 | SPO1178 | Hypothetical protein; Identified by similarity to GB:BAB48908.1. | MraZ, putative; Identified by match to protein family HMM PF02381; Belongs to the MraZ family. | 0.861 |
| SPO1180 | murD | SPO1180 | SPO1187 | Hypothetical protein; Identified by similarity to GB:BAB48908.1. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.612 |
| SPO1180 | murE | SPO1180 | SPO1182 | Hypothetical protein; Identified by similarity to GB:BAB48908.1. | UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.829 |
| SPO1180 | murF | SPO1180 | SPO1183 | Hypothetical protein; Identified by similarity to GB:BAB48908.1. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.829 |
| SPO1181 | SPO1180 | SPO1181 | SPO1180 | Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717. | Hypothetical protein; Identified by similarity to GB:BAB48908.1. | 0.870 |
| SPO1181 | SPO1194 | SPO1181 | SPO1194 | Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717. | Cell division protein FtsW; Identified by similarity to SP:P16457; match to protein family HMM PF01098; Belongs to the SEDS family. | 0.982 |
| SPO1181 | ddlB | SPO1181 | SPO1201 | Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717. | D-alanine--D-alanine ligase; Cell wall formation. | 0.811 |
| SPO1181 | ftsA | SPO1181 | SPO1203 | Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.852 |
| SPO1181 | ftsQ | SPO1181 | SPO1202 | Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717. | Cell division protein ftsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.914 |
| SPO1181 | ftsZ | SPO1181 | SPO1204 | Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.622 |
| SPO1181 | mraW | SPO1181 | SPO1179 | Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717. | S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.938 |
| SPO1181 | mraY | SPO1181 | SPO1184 | Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.967 |
| SPO1181 | mraZ | SPO1181 | SPO1178 | Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717. | MraZ, putative; Identified by match to protein family HMM PF02381; Belongs to the MraZ family. | 0.944 |
| SPO1181 | murB | SPO1181 | SPO1200 | Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.731 |
| SPO1181 | murC | SPO1181 | SPO1196 | Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.863 |
| SPO1181 | murD | SPO1181 | SPO1187 | Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.938 |
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