STRINGSTRING
SPO3573 SPO3573 eutA eutA SPO1698 SPO1698 SPO2437 SPO2437 SPO2450 SPO2450 SPO2419 SPO2419
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPO3573NADPH-dependent FMN reductase domain protein; Identified by match to protein family HMM PF03358. (180 aa)
eutAEctoine utilization protein EutA; Identified by match to protein family HMM PF01177; PMID: 19362561. (254 aa)
SPO1698Identified by match to protein family HMM PF01177. (241 aa)
SPO2437Identified by match to protein family HMM PF01177. (260 aa)
SPO2450Identified by match to protein family HMM PF01177. (250 aa)
SPO2419Hypothetical protein; Identified by similarity to GB:CAB55723.1. (383 aa)
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
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