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SPO0364 SPO0364 gshB gshB SPO0403 SPO0403 ggt ggt SPO0866 SPO0866 gst gst SPO1257 SPO1257 SPO1324 SPO1324 gor gor SPO1343 SPO1343 zwf-1 zwf-1 SPO2059 SPO2059 SPO2163 SPO2163 SPO2209 SPO2209 pepA pepA pepN pepN SPO2902 SPO2902 SPO2917 SPO2917 zwf-2 zwf-2 SPO3173 SPO3173 SPO3208 SPO3208 SPO3261 SPO3261 SPO3306 SPO3306 SPO3411 SPO3411 SPO3435 SPO3435 gshA gshA pxpA pxpA SPO3660 SPO3660 SPO3717 SPO3717 SPO3736 SPO3736 SPO3742 SPO3742 SPO3764 SPO3764
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPO0364Decarboxylase, pyridoxal-dependent; Identified by match to protein family HMM PF00278; match to protein family HMM PF02784; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (393 aa)
gshBGlutathione synthetase; Identified by similarity to SP:P04425; match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family. (310 aa)
SPO0403Hypothetical protein; Identified by similarity to GB:CAD13614.1. (291 aa)
ggtGamma-glutamyltranspeptidase; Identified by similarity to SP:P54422. (597 aa)
SPO0866Gamma-glutamyltranspeptidase, putative; Identified by match to protein family HMM PF01019. (596 aa)
gstGlutathione S-transferase; Identified by similarity to SP:P39100; match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily. (204 aa)
SPO1257Identified by match to protein family HMM PF02798; Belongs to the GST superfamily. (203 aa)
SPO1324Identified by match to protein family HMM PF02798. (233 aa)
gorGlutathione-disulfide reductase; Maintains high levels of reduced glutathione. (452 aa)
SPO1343Identified by match to protein family HMM PF00043; match to protein family HMM PF02798. (213 aa)
zwf-1Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (485 aa)
SPO2059Identified by match to protein family HMM PF02798. (280 aa)
SPO2163Hypothetical protein; Identified by similarity to PIR:AC3193. (209 aa)
SPO2209Glutamate--cysteine ligase family protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. (384 aa)
pepACytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. (493 aa)
pepNIdentified by similarity to SP:P37893; match to protein family HMM PF01433. (850 aa)
SPO2902Identified by match to protein family HMM PF00043; match to protein family HMM PF02798. (209 aa)
SPO2917Identified by match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily. (212 aa)
zwf-2Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (483 aa)
SPO3173Cation transport protein ChaC, putative; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. (177 aa)
SPO3208Identified by match to protein family HMM PF00043. (209 aa)
SPO3261Identified by match to protein family HMM PF00043; match to protein family HMM PF02798. (222 aa)
SPO3306Glutathione S-transferase, putative; Identified by similarity to GB:AAC44159.1; match to protein family HMM PF00043; match to protein family HMM PF02798. (204 aa)
SPO3411Gamma-glutamyltranspeptidase, putative; Identified by match to protein family HMM PF01019. (525 aa)
SPO3435Identified by match to protein family HMM PF00043; match to protein family HMM PF02798. (197 aa)
gshAGlutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily. (456 aa)
pxpALamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (253 aa)
SPO3660Urea amidolyase-like protein. (332 aa)
SPO3717Identified by match to protein family HMM PF00883; Belongs to the peptidase M17 family. (459 aa)
SPO3736Antioxidant, AhpC/Tsa family; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (161 aa)
SPO3742Glutathione peroxidase famly protein; Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family. (173 aa)
SPO3764Identified by match to protein family HMM PF02798. (221 aa)
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
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