(15 nodes) Preribosome, large subunit precursor, and Nop2p network (Chytriomyces confervae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A507DV82	Protein MAK16; Belongs to the MAK16 family. (334 aa)
	A0A507E3D0	Brix domain-containing protein. (237 aa)
	A0A507EBK2	Uncharacterized protein. (803 aa)
	A0A507EW80	Uncharacterized protein. (452 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (733 aa)
	A0A507F1W4	Uncharacterized protein. (947 aa)
	A0A507FCY0	RRM domain-containing protein. (528 aa)
	A0A507FEQ9	Uncharacterized protein. (498 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (700 aa)
	A0A507FIS7	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (927 aa)
	A0A507FJ74	Uncharacterized protein. (319 aa)
	A0A507FJW6	UPF0113 domain-containing protein. (82 aa)
	A0A507FPD2	CP-type G domain-containing protein. (621 aa)
	A0A507FSW3	Brix domain-containing protein. (513 aa)
	A0A507FVG9	Uncharacterized protein; Belongs to the DEAD box helicase family. (629 aa)

Your Current Organism:

Chytriomyces confervae

NCBI taxonomy Id: 246404
Other names: C. confervae, Chytridium confervae, Chytridium confervae (Wille) Minden, Chytriomyces confervae A.Batko

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A507DV82	A0A507E3D0	A0A507DV82	A0A507E3D0	Protein MAK16; Belongs to the MAK16 family.	Brix domain-containing protein.	0.980
A0A507DV82	A0A507EBK2	A0A507DV82	A0A507EBK2	Protein MAK16; Belongs to the MAK16 family.	Uncharacterized protein.	0.990
A0A507DV82	A0A507EW80	A0A507DV82	A0A507EW80	Protein MAK16; Belongs to the MAK16 family.	Uncharacterized protein.	0.983
A0A507DV82	A0A507F1W4	A0A507DV82	A0A507F1W4	Protein MAK16; Belongs to the MAK16 family.	Uncharacterized protein.	0.994
A0A507DV82	A0A507FCY0	A0A507DV82	A0A507FCY0	Protein MAK16; Belongs to the MAK16 family.	RRM domain-containing protein.	0.987
A0A507DV82	A0A507FEQ9	A0A507DV82	A0A507FEQ9	Protein MAK16; Belongs to the MAK16 family.	Uncharacterized protein.	0.997
A0A507DV82	A0A507FIS7	A0A507DV82	A0A507FIS7	Protein MAK16; Belongs to the MAK16 family.	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.965
A0A507DV82	A0A507FJ74	A0A507DV82	A0A507FJ74	Protein MAK16; Belongs to the MAK16 family.	Uncharacterized protein.	0.995
A0A507DV82	A0A507FJW6	A0A507DV82	A0A507FJW6	Protein MAK16; Belongs to the MAK16 family.	UPF0113 domain-containing protein.	0.967
A0A507DV82	A0A507FPD2	A0A507DV82	A0A507FPD2	Protein MAK16; Belongs to the MAK16 family.	CP-type G domain-containing protein.	0.980
A0A507DV82	A0A507FSW3	A0A507DV82	A0A507FSW3	Protein MAK16; Belongs to the MAK16 family.	Brix domain-containing protein.	0.998
A0A507DV82	A0A507FVG9	A0A507DV82	A0A507FVG9	Protein MAK16; Belongs to the MAK16 family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.995
A0A507DV82	ERB1	A0A507DV82	A0A507FGN7	Protein MAK16; Belongs to the MAK16 family.	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.940
A0A507DV82	NOP7	A0A507DV82	A0A507F0K1	Protein MAK16; Belongs to the MAK16 family.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.979
A0A507E3D0	A0A507DV82	A0A507E3D0	A0A507DV82	Brix domain-containing protein.	Protein MAK16; Belongs to the MAK16 family.	0.980
A0A507E3D0	A0A507EBK2	A0A507E3D0	A0A507EBK2	Brix domain-containing protein.	Uncharacterized protein.	0.985
A0A507E3D0	A0A507EW80	A0A507E3D0	A0A507EW80	Brix domain-containing protein.	Uncharacterized protein.	0.981
A0A507E3D0	A0A507F1W4	A0A507E3D0	A0A507F1W4	Brix domain-containing protein.	Uncharacterized protein.	0.986
A0A507E3D0	A0A507FCY0	A0A507E3D0	A0A507FCY0	Brix domain-containing protein.	RRM domain-containing protein.	0.979
A0A507E3D0	A0A507FEQ9	A0A507E3D0	A0A507FEQ9	Brix domain-containing protein.	Uncharacterized protein.	0.990