14 items (Tupaia chinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WIPI1	WD repeat domain phosphoinositide-interacting protein 1. (463 aa)
	ATG5	Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
	L9KC17_TUPCH	Autophagy-related protein 3. (249 aa)
	L9KI54_TUPCH	Serine/threonine-protein kinase ULK2. (717 aa)
	L9KPV3_TUPCH	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (641 aa)
	ATG2A	Autophagy-related protein 2 like protein A. (1988 aa)
	L9JDZ8_TUPCH	Autophagy-related protein 2 like protein B. (1768 aa)
	L9J8P4_TUPCH	Ubiquitin-like modifier-activating enzyme ATG7. (598 aa)
	L8Y2Q1_TUPCH	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (893 aa)
	L9L4M5_TUPCH	WD repeat domain phosphoinositide-interacting protein 2. (482 aa)
	WIPI2	WD repeat domain phosphoinositide-interacting protein 2. (55 aa)
	L9JEV4_TUPCH	Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (447 aa)
	ATG3	Autophagy-related protein 3. (240 aa)
	L9LF39_TUPCH	RB1-inducible coiled-coil protein 1. (1033 aa)

Your Current Organism:

Tupaia chinensis

NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATG2A	ATG5	L9KV98	L9JLM6	Autophagy-related protein 2 like protein A.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.523
ATG2A	L8Y2Q1_TUPCH	L9KV98	L8Y2Q1	Autophagy-related protein 2 like protein A.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.684
ATG2A	L9J8P4_TUPCH	L9KV98	L9J8P4	Autophagy-related protein 2 like protein A.	Ubiquitin-like modifier-activating enzyme ATG7.	0.519
ATG2A	L9JEV4_TUPCH	L9KV98	L9JEV4	Autophagy-related protein 2 like protein A.	Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.	0.536
ATG2A	L9KI54_TUPCH	L9KV98	L9KI54	Autophagy-related protein 2 like protein A.	Serine/threonine-protein kinase ULK2.	0.904
ATG2A	L9KPV3_TUPCH	L9KV98	L9KPV3	Autophagy-related protein 2 like protein A.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.585
ATG2A	L9L4M5_TUPCH	L9KV98	L9L4M5	Autophagy-related protein 2 like protein A.	WD repeat domain phosphoinositide-interacting protein 2.	0.696
ATG2A	L9LF39_TUPCH	L9KV98	L9LF39	Autophagy-related protein 2 like protein A.	RB1-inducible coiled-coil protein 1.	0.552
ATG2A	WIPI1	L9KV98	L9KYA0	Autophagy-related protein 2 like protein A.	WD repeat domain phosphoinositide-interacting protein 1.	0.980
ATG2A	WIPI2	L9KV98	L9L879	Autophagy-related protein 2 like protein A.	WD repeat domain phosphoinositide-interacting protein 2.	0.968
ATG3	ATG5	L9LBI3	L9JLM6	Autophagy-related protein 3.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.997
ATG3	L8Y2Q1_TUPCH	L9LBI3	L8Y2Q1	Autophagy-related protein 3.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.516
ATG3	L9J8P4_TUPCH	L9LBI3	L9J8P4	Autophagy-related protein 3.	Ubiquitin-like modifier-activating enzyme ATG7.	0.955
ATG3	L9JEV4_TUPCH	L9LBI3	L9JEV4	Autophagy-related protein 3.	Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.	0.518
ATG3	L9KI54_TUPCH	L9LBI3	L9KI54	Autophagy-related protein 3.	Serine/threonine-protein kinase ULK2.	0.904
ATG3	L9L4M5_TUPCH	L9LBI3	L9L4M5	Autophagy-related protein 3.	WD repeat domain phosphoinositide-interacting protein 2.	0.648
ATG3	L9LF39_TUPCH	L9LBI3	L9LF39	Autophagy-related protein 3.	RB1-inducible coiled-coil protein 1.	0.463
ATG3	WIPI1	L9LBI3	L9KYA0	Autophagy-related protein 3.	WD repeat domain phosphoinositide-interacting protein 1.	0.648
ATG3	WIPI2	L9LBI3	L9L879	Autophagy-related protein 3.	WD repeat domain phosphoinositide-interacting protein 2.	0.648
ATG5	ATG2A	L9JLM6	L9KV98	Autophagy protein 5; Involved in autophagic vesicle formation.	Autophagy-related protein 2 like protein A.	0.523