53 items (Tupaia chinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	COL4A4	Collagen alpha-1(IV) chain. (1527 aa)
	L9L6S9_TUPCH	Laminin subunit alpha-2. (2452 aa)
	THBS4	Thrombospondin-4. (990 aa)
	LAMC1	Laminin subunit gamma-1. (456 aa)
	L9L4J1_TUPCH	Collagen alpha-1(VIII) chain. (638 aa)
	LAMC2	Laminin subunit gamma-2. (1219 aa)
	L9L3J4_TUPCH	Laminin subunit gamma-1. (1028 aa)
	SMOC2	SPARC-related modular calcium-binding protein 2. (1432 aa)
	L9L0Q8_TUPCH	Basement membrane-specific heparan sulfate proteoglycan core protein. (4562 aa)
	L9L053_TUPCH	Nidogen-1. (1141 aa)
	L9KYJ3_TUPCH	Uncharacterized protein. (259 aa)
	L9KXX7_TUPCH	Collagen alpha-2(VIII) chain. (692 aa)
	L8Y5R2_TUPCH	Collagen alpha-1(XVIII) chain. (1286 aa)
	L8Y5J4_TUPCH	Hemicentin-1. (4160 aa)
	L8Y4A4_TUPCH	Papilin. (1214 aa)
	USP19	Laminin subunit beta-2. (3008 aa)
	CASK	Peripheral plasma membrane protein CASK. (1019 aa)
	NTNG1	Netrin-G1. (215 aa)
	SPARC	SPARC. (303 aa)
	L9KN89_TUPCH	Extracellular matrix protein FRAS1. (2900 aa)
	L9KN72_TUPCH	Uncharacterized protein. (234 aa)
	L9KMF8_TUPCH	Extracellular matrix protein FRAS1. (1092 aa)
	L9KFM9_TUPCH	Netrin-4. (682 aa)
	L9K403_TUPCH	Multiple epidermal growth factor-like domains protein 9. (447 aa)
	ACHE	Acetylcholinesterase; Belongs to the type-B carboxylesterase/lipase family. (793 aa)
	USH2A	Usherin. (5016 aa)
	EGFLAM	Pikachurin. (1061 aa)
	L9JRE4_TUPCH	Netrin-1. (299 aa)
	NTN1	Netrin-1. (370 aa)
	L9JKB2_TUPCH	Prolyl 3-hydroxylase 2. (660 aa)
	L9JIK5_TUPCH	Laminin subunit alpha-4. (1822 aa)
	L9JIH0_TUPCH	Laminin subunit alpha-5. (3484 aa)
	LAMA4	Laminin subunit alpha-4. (103 aa)
	L9JFR7_TUPCH	Fibronectin. (2379 aa)
	L9JF25_TUPCH	Laminin subunit alpha-3. (3073 aa)
	COL4A1	Collagen alpha-1(IV) chain. (1559 aa)
	NID2	Nidogen-2. (1386 aa)
	L9JBM5_TUPCH	Laminin subunit beta-3. (1415 aa)
	L9JA53_TUPCH	Collagen alpha-2(IV) chain. (499 aa)
	L8YI80_TUPCH	Laminin subunit beta-4. (971 aa)
	RELL2	RELT-like protein 2. (292 aa)
	L8YER0_TUPCH	FRAS1-related extracellular matrix protein 1. (1832 aa)
	VWA1	Von Willebrand factor A domain-containing protein 1. (436 aa)
	ANG	Angiogenin; Belongs to the pancreatic ribonuclease family. (144 aa)
	LAMB1	Laminin subunit beta-1. (1821 aa)
	L8YCK7_TUPCH	Collagen alpha-1(XV) chain. (708 aa)
	LAMC3	Laminin subunit gamma-3. (1463 aa)
	AGRN	Agrin. (1921 aa)
	L8Y912_TUPCH	Laminin subunit alpha-1. (2416 aa)
	L8Y8L5_TUPCH	Agrin. (110 aa)
	L9LBX3_TUPCH	Lysyl oxidase like protein 2. (635 aa)
	LOXL2	Lysyl oxidase like protein 2. (244 aa)
	L8Y6M1_TUPCH	Collagen alpha-1(XXVIII) chain. (326 aa)

Your Current Organism:

Tupaia chinensis

NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACHE	AGRN	L9K1D4	L8YCF8	Acetylcholinesterase; Belongs to the type-B carboxylesterase/lipase family.	Agrin.	0.508
ACHE	CASK	L9K1D4	L9KT04	Acetylcholinesterase; Belongs to the type-B carboxylesterase/lipase family.	Peripheral plasma membrane protein CASK.	0.469
ACHE	L9L0Q8_TUPCH	L9K1D4	L9L0Q8	Acetylcholinesterase; Belongs to the type-B carboxylesterase/lipase family.	Basement membrane-specific heparan sulfate proteoglycan core protein.	0.582
AGRN	ACHE	L8YCF8	L9K1D4	Agrin.	Acetylcholinesterase; Belongs to the type-B carboxylesterase/lipase family.	0.508
AGRN	L8Y8L5_TUPCH	L8YCF8	L8Y8L5	Agrin.	Agrin.	0.900
AGRN	L9L053_TUPCH	L8YCF8	L9L053	Agrin.	Nidogen-1.	0.793
AGRN	L9L0Q8_TUPCH	L8YCF8	L9L0Q8	Agrin.	Basement membrane-specific heparan sulfate proteoglycan core protein.	0.667
AGRN	NID2	L8YCF8	L9JDJ4	Agrin.	Nidogen-2.	0.660
CASK	ACHE	L9KT04	L9K1D4	Peripheral plasma membrane protein CASK.	Acetylcholinesterase; Belongs to the type-B carboxylesterase/lipase family.	0.469
CASK	L9L053_TUPCH	L9KT04	L9L053	Peripheral plasma membrane protein CASK.	Nidogen-1.	0.467
CASK	NID2	L9KT04	L9JDJ4	Peripheral plasma membrane protein CASK.	Nidogen-2.	0.467
COL4A1	COL4A4	L9JER2	L9L9B2	Collagen alpha-1(IV) chain.	Collagen alpha-1(IV) chain.	0.948
COL4A1	L9JA53_TUPCH	L9JER2	L9JA53	Collagen alpha-1(IV) chain.	Collagen alpha-2(IV) chain.	0.998
COL4A1	L9KXX7_TUPCH	L9JER2	L9KXX7	Collagen alpha-1(IV) chain.	Collagen alpha-2(VIII) chain.	0.485
COL4A1	L9L053_TUPCH	L9JER2	L9L053	Collagen alpha-1(IV) chain.	Nidogen-1.	0.501
COL4A1	L9L0Q8_TUPCH	L9JER2	L9L0Q8	Collagen alpha-1(IV) chain.	Basement membrane-specific heparan sulfate proteoglycan core protein.	0.448
COL4A1	L9L3J4_TUPCH	L9JER2	L9L3J4	Collagen alpha-1(IV) chain.	Laminin subunit gamma-1.	0.536
COL4A1	L9L4J1_TUPCH	L9JER2	L9L4J1	Collagen alpha-1(IV) chain.	Collagen alpha-1(VIII) chain.	0.425
COL4A1	LAMB1	L9JER2	L8YDC2	Collagen alpha-1(IV) chain.	Laminin subunit beta-1.	0.950
COL4A1	LAMC1	L9JER2	L9L4S6	Collagen alpha-1(IV) chain.	Laminin subunit gamma-1.	0.911