50 items (Tupaia chinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BGN	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (405 aa)
	VTN	Vitronectin. (480 aa)
	L8Y8L5_TUPCH	Agrin. (110 aa)
	MATN3	Matrilin-3. (439 aa)
	L8YA38_TUPCH	Integrin alpha-IIb; Belongs to the integrin alpha chain family. (1104 aa)
	L8YAP5_TUPCH	Integrin alpha-7; Belongs to the integrin alpha chain family. (1240 aa)
	L8YBP4_TUPCH	Integrin alpha-V; Belongs to the integrin alpha chain family. (730 aa)
	MATN1	Cartilage matrix protein. (476 aa)
	AGRN	Agrin. (1921 aa)
	L8YCU5_TUPCH	Collagen alpha-1(VI) chain. (381 aa)
	L8YCV5_TUPCH	Collagen alpha-3(V) chain. (1127 aa)
	LAMB1	Laminin subunit beta-1. (1821 aa)
	L8YDE4_TUPCH	Integrin alpha-9; Belongs to the integrin alpha chain family. (508 aa)
	L8YEM2_TUPCH	Von Willebrand factor A domain-containing protein 2. (732 aa)
	L9JA52_TUPCH	Integrin alpha-8; Belongs to the integrin alpha chain family. (865 aa)
	ITGB3	Integrin beta; Belongs to the integrin beta chain family. (798 aa)
	ITGB1	Integrin beta; Belongs to the integrin beta chain family. (741 aa)
	LRP4	Low-density lipoprotein receptor-related protein 4. (1970 aa)
	COL1A2	Collagen alpha-2(I) chain. (1195 aa)
	L9JF25_TUPCH	Laminin subunit alpha-3. (3073 aa)
	L9JFR7_TUPCH	Fibronectin. (2379 aa)
	L9JIH0_TUPCH	Laminin subunit alpha-5. (3484 aa)
	L9JJ12_TUPCH	Collagen alpha-2(I) chain. (117 aa)
	BCAN	Brevican core protein. (977 aa)
	DCN	Decorin; May affect the rate of fibrils formation. (360 aa)
	L9KFG4_TUPCH	Integrin beta; Belongs to the integrin beta chain family. (899 aa)
	L9KFJ2_TUPCH	Pancreatic trypsin inhibitor. (96 aa)
	MATN4	Matrilin-4. (656 aa)
	TNR	Tenascin-R. (1400 aa)
	ACAN	Aggrecan core protein. (2240 aa)
	L9KL66_TUPCH	Tenascin-X. (3680 aa)
	L9KLG0_TUPCH	Collagen alpha-3(VI) chain. (3199 aa)
	SPARC	SPARC. (303 aa)
	L9KPN2_TUPCH	Uncharacterized protein. (201 aa)
	MCMDC2	Uncharacterized protein. (192 aa)
	L9KSE2_TUPCH	Integrin alpha-2; Belongs to the integrin alpha chain family. (1169 aa)
	COL5A2	Collagen alpha-2(V) chain. (1394 aa)
	L9KW25_TUPCH	Neurocan core protein. (1217 aa)
	L9KXD3_TUPCH	Cartilage oligomeric matrix protein. (860 aa)
	L9L0Q8_TUPCH	Basement membrane-specific heparan sulfate proteoglycan core protein. (4562 aa)
	L9L3J4_TUPCH	Laminin subunit gamma-1. (1028 aa)
	VCAN	Versican core protein. (3258 aa)
	L9L5F6_TUPCH	Dentin sialophosphoprotein. (943 aa)
	HAPLN1	Hyaluronan and proteoglycan link protein 1. (354 aa)
	L9L5Y6_TUPCH	Muscle, skeletal receptor tyrosine-protein kinase. (758 aa)
	L9L6S9_TUPCH	Laminin subunit alpha-2. (2452 aa)
	L9L7K4_TUPCH	Tenascin. (2292 aa)
	L9L909_TUPCH	Dentin matrix acidic phosphoprotein 1. (474 aa)
	APP	Amyloid beta A4 protein. (725 aa)
	USP19	Laminin subunit beta-2. (3008 aa)

Your Current Organism:

Tupaia chinensis

NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACAN	BCAN	L9KJW2	L9KAL5	Aggrecan core protein.	Brevican core protein.	0.706
ACAN	BGN	L9KJW2	L8Y512	Aggrecan core protein.	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	0.790
ACAN	DCN	L9KJW2	L9KF58	Aggrecan core protein.	Decorin; May affect the rate of fibrils formation.	0.668
ACAN	HAPLN1	L9KJW2	L9L5L9	Aggrecan core protein.	Hyaluronan and proteoglycan link protein 1.	0.878
ACAN	L9KW25_TUPCH	L9KJW2	L9KW25	Aggrecan core protein.	Neurocan core protein.	0.480
ACAN	L9KXD3_TUPCH	L9KJW2	L9KXD3	Aggrecan core protein.	Cartilage oligomeric matrix protein.	0.764
ACAN	L9L0Q8_TUPCH	L9KJW2	L9L0Q8	Aggrecan core protein.	Basement membrane-specific heparan sulfate proteoglycan core protein.	0.575
ACAN	L9L7K4_TUPCH	L9KJW2	L9L7K4	Aggrecan core protein.	Tenascin.	0.853
ACAN	MATN1	L9KJW2	L8YCB5	Aggrecan core protein.	Cartilage matrix protein.	0.568
ACAN	MATN3	L9KJW2	L8Y9S8	Aggrecan core protein.	Matrilin-3.	0.564
ACAN	MATN4	L9KJW2	L9KFJ8	Aggrecan core protein.	Matrilin-4.	0.486
ACAN	TNR	L9KJW2	L9KHS3	Aggrecan core protein.	Tenascin-R.	0.926
ACAN	VCAN	L9KJW2	L9L4B2	Aggrecan core protein.	Versican core protein.	0.599
AGRN	BCAN	L8YCF8	L9KAL5	Agrin.	Brevican core protein.	0.640
AGRN	BGN	L8YCF8	L8Y512	Agrin.	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	0.639
AGRN	DCN	L8YCF8	L9KF58	Agrin.	Decorin; May affect the rate of fibrils formation.	0.601
AGRN	L8Y8L5_TUPCH	L8YCF8	L8Y8L5	Agrin.	Agrin.	0.900
AGRN	L9L0Q8_TUPCH	L8YCF8	L9L0Q8	Agrin.	Basement membrane-specific heparan sulfate proteoglycan core protein.	0.667
AGRN	L9L5Y6_TUPCH	L8YCF8	L9L5Y6	Agrin.	Muscle, skeletal receptor tyrosine-protein kinase.	0.694
AGRN	LRP4	L8YCF8	L9JEV8	Agrin.	Low-density lipoprotein receptor-related protein 4.	0.969