27 items (Tupaia chinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RAB7A	Ras-related protein Rab-7a. (207 aa)
	HRAS	GTPase HRas. (187 aa)
	TBC1D17	TBC1 domain family member 17. (698 aa)
	RAB7B	Solute carrier family 26 member 9. (1191 aa)
	BECN2	Beclin-1-like protein 1. (383 aa)
	BCL2L13	Bcl-2-like protein 13. (509 aa)
	FOXO3	Forkhead box protein O3. (514 aa)
	ATG5	Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
	TAX1BP1	Tax1-binding protein 1. (789 aa)
	BECN1	Beclin-1. (462 aa)
	FIS1	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. (152 aa)
	CSNK2B	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (235 aa)
	PARK2	E3 ubiquitin-protein ligase parkin. (140 aa)
	GABARAPL2	Gamma-aminobutyric acid receptor-associated protein-like 2. (130 aa)
	USP15	Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (952 aa)
	ATF4	Cyclic AMP-dependent transcription factor ATF-4. (529 aa)
	NRAS	GTPase NRas. (189 aa)
	ULK1	Serine/threonine-protein kinase ULK1. (2910 aa)
	PGAM5	Serine/threonine-protein phosphatase PGAM5, mitochondrial. (367 aa)
	SQSTM1	Sequestosome-1. (372 aa)
	UBA52	Ubiquitin-60S ribosomal protein L40. (146 aa)
	TFEB	Transcription factor EB. (487 aa)
	PINK1	Serine/threonine-protein kinase PINK1, mitochondrial. (486 aa)
	MFN2	Mitofusin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (1206 aa)
	E2F1	Transcription factor E2F1. (175 aa)
	RRAS2	Ras-related protein R-Ras2. (171 aa)
	SRC	Tyrosine-protein kinase. (526 aa)

Your Current Organism:

Tupaia chinensis

NCBI taxonomy Id: 246437
Other names: Chinese tree shrew, T. chinensis, Tupaia belangeri chinensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATF4	PINK1	L9KNY4	L9L0R7	Cyclic AMP-dependent transcription factor ATF-4.	Serine/threonine-protein kinase PINK1, mitochondrial.	0.401
ATG5	BECN1	L9JLM6	L9JW49	Autophagy protein 5; Involved in autophagic vesicle formation.	Beclin-1.	0.773
ATG5	BECN2	L9JLM6	L9JG00	Autophagy protein 5; Involved in autophagic vesicle formation.	Beclin-1-like protein 1.	0.773
ATG5	FIS1	L9JLM6	L9K1T0	Autophagy protein 5; Involved in autophagic vesicle formation.	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	0.412
ATG5	GABARAPL2	L9JLM6	L9KKK5	Autophagy protein 5; Involved in autophagic vesicle formation.	Gamma-aminobutyric acid receptor-associated protein-like 2.	0.989
ATG5	MFN2	L9JLM6	L9L102	Autophagy protein 5; Involved in autophagic vesicle formation.	Mitofusin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.724
ATG5	PARK2	L9JLM6	L9KKI4	Autophagy protein 5; Involved in autophagic vesicle formation.	E3 ubiquitin-protein ligase parkin.	0.444
ATG5	PINK1	L9JLM6	L9L0R7	Autophagy protein 5; Involved in autophagic vesicle formation.	Serine/threonine-protein kinase PINK1, mitochondrial.	0.635
ATG5	SQSTM1	L9JLM6	L9KW01	Autophagy protein 5; Involved in autophagic vesicle formation.	Sequestosome-1.	0.830
ATG5	TFEB	L9JLM6	L9KY47	Autophagy protein 5; Involved in autophagic vesicle formation.	Transcription factor EB.	0.444
ATG5	ULK1	L9JLM6	L9KVM1	Autophagy protein 5; Involved in autophagic vesicle formation.	Serine/threonine-protein kinase ULK1.	0.827
BCL2L13	GABARAPL2	L9JHF9	L9KKK5	Bcl-2-like protein 13.	Gamma-aminobutyric acid receptor-associated protein-like 2.	0.936
BCL2L13	TAX1BP1	L9JHF9	L9JVE2	Bcl-2-like protein 13.	Tax1-binding protein 1.	0.522
BECN1	ATG5	L9JW49	L9JLM6	Beclin-1.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.773
BECN1	BECN2	L9JW49	L9JG00	Beclin-1.	Beclin-1-like protein 1.	0.902
BECN1	GABARAPL2	L9JW49	L9KKK5	Beclin-1.	Gamma-aminobutyric acid receptor-associated protein-like 2.	0.978
BECN1	PARK2	L9JW49	L9KKI4	Beclin-1.	E3 ubiquitin-protein ligase parkin.	0.496
BECN1	PINK1	L9JW49	L9L0R7	Beclin-1.	Serine/threonine-protein kinase PINK1, mitochondrial.	0.942
BECN1	SQSTM1	L9JW49	L9KW01	Beclin-1.	Sequestosome-1.	0.556
BECN1	TFEB	L9JW49	L9KY47	Beclin-1.	Transcription factor EB.	0.456