STRINGSTRING
ccsA_1 ccsA_1 ALJ58457.1 ALJ58457.1 ALJ58458.1 ALJ58458.1 lsrF lsrF dhaL dhaL dhaK dhaK ALJ58462.1 ALJ58462.1 ALJ58463.1 ALJ58463.1 ALJ58464.1 ALJ58464.1 ALJ58465.1 ALJ58465.1 mdtC_1 mdtC_1 ALJ58965.1 ALJ58965.1 mdtC_2 mdtC_2 ALJ58967.1 ALJ58967.1 ALJ58973.1 ALJ58973.1 ALJ58974.1 ALJ58974.1 ALJ58980.1 ALJ58980.1 ALJ59106.1 ALJ59106.1 ALJ59977.1 ALJ59977.1 ALJ59979.1 ALJ59979.1 lepB_6 lepB_6 ALJ59982.1 ALJ59982.1 ALJ59983.1 ALJ59983.1 ALJ61228.1 ALJ61228.1 lepB_7 lepB_7 ALJ61230.1 ALJ61230.1 ALJ61231.1 ALJ61231.1 ptp ptp
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ccsA_1Cytochrome c biogenesis protein CcsA. (801 aa)
ALJ58457.1Formylglycine-generating sulfatase enzyme. (1330 aa)
ALJ58458.1Arylsulfotransferase (ASST). (298 aa)
lsrFPutative aldolase LsrF. (291 aa)
dhaLPTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL. (204 aa)
dhaKPTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK. (335 aa)
ALJ58462.1Hypothetical protein. (105 aa)
ALJ58463.1D-lyxose ketol-isomerase. (226 aa)
ALJ58464.1Endoribonuclease L-PSP. (385 aa)
ALJ58465.1Hypothetical protein. (612 aa)
mdtC_1Multidrug resistance protein MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1064 aa)
ALJ58965.1Outer membrane efflux protein. (492 aa)
mdtC_2Multidrug resistance protein MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1021 aa)
ALJ58967.1Multidrug resistance protein MdtN; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (360 aa)
ALJ58973.1O-Antigen ligase. (536 aa)
ALJ58974.1Hypothetical protein. (647 aa)
ALJ58980.1Hypothetical protein. (408 aa)
ALJ59106.1Hypothetical protein. (357 aa)
ALJ59977.1O-Antigen ligase. (554 aa)
ALJ59979.1Hypothetical protein. (387 aa)
lepB_6Signal peptidase I; Belongs to the peptidase S26 family. (313 aa)
ALJ59982.1Hypothetical protein. (650 aa)
ALJ59983.1Hypothetical protein. (398 aa)
ALJ61228.1Hypothetical protein. (637 aa)
lepB_7Signal peptidase I; Belongs to the peptidase S26 family. (297 aa)
ALJ61230.1O-Antigen ligase. (562 aa)
ALJ61231.1Hypothetical protein. (147 aa)
ptpProlyl tri/tetrapeptidyl aminopeptidase precursor. (431 aa)
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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