STRINGSTRING
NFA_45180 NFA_45180 pncA pncA NFA_11380 NFA_11380 NFA_11390 NFA_11390 NFA_11960 NFA_11960 NFA_12130 NFA_12130 NFA_12160 NFA_12160 hutI hutI NFA_1270 NFA_1270 NFA_12720 NFA_12720 NFA_1280 NFA_1280 NFA_13000 NFA_13000 mtnD1 mtnD1 NFA_1620 NFA_1620 NFA_16290 NFA_16290 NFA_16570 NFA_16570 NFA_17270 NFA_17270 bioB bioB NFA_21340 NFA_21340 NFA_21760 NFA_21760 NFA_21920 NFA_21920 NFA_22290 NFA_22290 NFA_22480 NFA_22480 NFA_22920 NFA_22920 NFA_22930 NFA_22930 NFA_24320 NFA_24320 NFA_25810 NFA_25810 NFA_25830 NFA_25830 NFA_25870 NFA_25870 cyp51 cyp51 nuoH nuoH nuoB nuoB ectD ectD NFA_28450 NFA_28450 NFA_30590 NFA_30590 NFA_31890 NFA_31890 NFA_33510 NFA_33510 NFA_33560 NFA_33560 NFA_33740 NFA_33740 NFA_33880 NFA_33880 NFA_34990 NFA_34990 NFA_35020 NFA_35020 NFA_35220 NFA_35220 NFA_35560 NFA_35560 NFA_38320 NFA_38320 gcpE gcpE NFA_42970 NFA_42970 NFA_43360 NFA_43360 NFA_43600 NFA_43600 NFA_43820 NFA_43820 NFA_45170 NFA_45170 mtnD2 mtnD2 NFA_46160 NFA_46160 NFA_46170 NFA_46170 NFA_46410 NFA_46410 NFA_4750 NFA_4750 NFA_48610 NFA_48610 egtB egtB NFA_4950 NFA_4950 NFA_5180 NFA_5180 NFA_52390 NFA_52390 NFA_52960 NFA_52960 NFA_53040 NFA_53040 NFA_53100 NFA_53100 NFA_53110 NFA_53110 NFA_5330 NFA_5330 NFA_53570 NFA_53570 NFA_56380 NFA_56380 tsaD tsaD NFA_9410 NFA_9410
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NFA_45180Cytochrome P450 monooxygenase. (414 aa)
pncAPutative nicotinamidase. (189 aa)
NFA_11380Cytochrome P450 monooxygenase. (502 aa)
NFA_11390Putative ferredoxin. (64 aa)
NFA_11960Cytochrome P450 monooxygenase. (417 aa)
NFA_12130Cytochrome P450 monooxygenase. (396 aa)
NFA_12160Cytochrome P450 monooxygenase. (399 aa)
hutIPutative imidazolone-5-propionate hydrolase; Belongs to the metallo-dependent hydrolases superfamily. HutI family. (392 aa)
NFA_1270Putative ferritin family protein; Iron-storage protein. (182 aa)
NFA_12720Hypothetical protein. (287 aa)
NFA_1280Putative ferritin family protein; Iron-storage protein. (182 aa)
NFA_13000Hypothetical protein; Belongs to the Dps family. (161 aa)
mtnD1Putative oxidoreductase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. (189 aa)
NFA_1620Hypothetical protein. (218 aa)
NFA_16290Hypothetical protein. (274 aa)
NFA_16570Putative dioxygenase. (363 aa)
NFA_17270Putative cytochrome c component. (287 aa)
bioBPutative biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (337 aa)
NFA_21340Cytochrome P450 monooxygenase. (425 aa)
NFA_21760Cytochrome P450 monooxygenase. (451 aa)
NFA_21920Hypothetical protein. (215 aa)
NFA_22290Cytochrome P450 monooxygenase. (403 aa)
NFA_22480Putative terminal oxygenase. (395 aa)
NFA_22920Cytochrome P450 monooxygenase. (421 aa)
NFA_22930Cytochrome P450 monooxygenase. (409 aa)
NFA_24320Cytochrome P450 monooxygenase. (408 aa)
NFA_25810Cytochrome P450 monooxygenase. (401 aa)
NFA_25830Putative ferredoxin. (75 aa)
NFA_25870Cytochrome P450 monooxygenase. (408 aa)
cyp51Cytochrome P450 monooxygenase. (452 aa)
nuoHPutative NADH dehydrogenase I chain H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone; In the C-terminal section; belongs to the complex I 23 kDa subunit family. (597 aa)
nuoBPutative NADH dehydrogenase I chain B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (184 aa)
ectDPutative ectoine hydroxylase; Involved in the biosynthesis of 5-hydroxyectoine, called compatible solute, which helps organisms to survive extreme osmotic stress by acting as a highly soluble organic osmolyte. Catalyzes the 2- oxoglutarate-dependent selective hydroxylation of L-ectoine to yield (4S,5S)-5-hydroxyectoine; Belongs to the PhyH family. EctD subfamily. (298 aa)
NFA_28450Putative ring-cleavage dioxygenase large subunit. (429 aa)
NFA_30590Cytochrome P450 monooxygenase. (404 aa)
NFA_31890Hypothetical protein. (286 aa)
NFA_33510Cytochrome P450 monooxygenase. (405 aa)
NFA_33560Putative oxygenase. (382 aa)
NFA_33740Putative oxygenase. (391 aa)
NFA_33880Cytochrome P450 monooxygenase. (409 aa)
NFA_34990Cytochrome P450 monooxygenase. (397 aa)
NFA_35020Hypothetical protein. (284 aa)
NFA_35220Putative catechol 1,2-dioxygenase. (285 aa)
NFA_35560Hypothetical protein. (160 aa)
NFA_38320Hypothetical protein. (257 aa)
gcpEPutative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. (385 aa)
NFA_42970Putative dioxygenase. (296 aa)
NFA_43360Hypothetical protein. (258 aa)
NFA_43600Cytochrome P450 monooxygenase. (472 aa)
NFA_43820Hypothetical protein; Belongs to the Dps family. (159 aa)
NFA_45170Cytochrome P450 monooxygenase. (434 aa)
mtnD2Putative oxidoreductase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. (191 aa)
NFA_46160Putative rubredoxin. (60 aa)
NFA_46170Putative rubredoxin; Belongs to the rubredoxin family. (57 aa)
NFA_46410Cytochrome P450 monooxygenase. (436 aa)
NFA_4750Putative oxygenase. (405 aa)
NFA_48610Hypothetical protein. (383 aa)
egtBHypothetical protein; Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma-L- glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine; Belongs to the EgtB family. (446 aa)
NFA_4950Cytochrome P450 monooxygenase. (445 aa)
NFA_5180Cytochrome P450 monooxygenase. (422 aa)
NFA_52390Putative oxidoreductase. (906 aa)
NFA_52960Hypothetical protein. (451 aa)
NFA_53040Putative dioxygenase. (401 aa)
NFA_53100Cytochrome P450 monooxygenase. (424 aa)
NFA_53110Cytochrome P450 monooxygenase. (410 aa)
NFA_5330Putative ferredoxin. (62 aa)
NFA_53570Hypothetical protein. (285 aa)
NFA_56380Cytochrome P450 monooxygenase. (426 aa)
tsaDPutative glycoprotease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (344 aa)
NFA_9410Putative phenylalanine hydroxylase. (299 aa)
Your Current Organism:
Nocardia farcinica
NCBI taxonomy Id: 247156
Other names: N. farcinica IFM 10152, Nocardia farcinica IFM 10152, Nocardia farcinica str. IFM 10152, Nocardia farcinica strain IFM 10152
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