STRINGSTRING
GAB61777.1 GAB61777.1 GAB60816.1 GAB60816.1 lpxD lpxD GAB61202.1 GAB61202.1 GAB61219.1 GAB61219.1 GAB61220.1 GAB61220.1 kdsB kdsB GAB64313.1 GAB64313.1 hldE hldE gmhA gmhA GAB64295.1 GAB64295.1 GAB64075.1 GAB64075.1 rnfE rnfE lpxD-2 lpxD-2 GAB63809.1 GAB63809.1 GAB63808.1 GAB63808.1 GAB63776.1 GAB63776.1 GAB63761.1 GAB63761.1 GAB63694.1 GAB63694.1 GAB63677.1 GAB63677.1 GAB63640.1 GAB63640.1 GAB63602.1 GAB63602.1 GAB63600.1 GAB63600.1 GAB63598.1 GAB63598.1 GAB63597.1 GAB63597.1 GAB63562.1 GAB63562.1 GAB63553.1 GAB63553.1 GAB63387.1 GAB63387.1 GAB63362.1 GAB63362.1 GAB63201.1 GAB63201.1 GAB63010.1 GAB63010.1 GAB62982.1 GAB62982.1 kdsA kdsA lpxC lpxC GAB61412.1 GAB61412.1 GAB61424.1 GAB61424.1 GAB61476.1 GAB61476.1 GAB61477.1 GAB61477.1 GAB61614.1 GAB61614.1 lpxK lpxK cas1-2 cas1-2 GAB62502.1 GAB62502.1 GAB62393.1 GAB62393.1 GAB62391.1 GAB62391.1 GAB62126.1 GAB62126.1 GAB61792.1 GAB61792.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GAB61777.1Conserved hypothetical protein. (894 aa)
GAB60816.1Hypothetical protein. (454 aa)
lpxDUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (337 aa)
GAB61202.1Putative glycosyltransferase. (590 aa)
GAB61219.1Ca2+/Na+ antiporter. (317 aa)
GAB61220.1ADP-heptose--LPS heptosyltransferase. (351 aa)
kdsB3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (255 aa)
GAB64313.1Truncated DNA polymerase. (120 aa)
hldEADP-heptose synthase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. (498 aa)
gmhAPhosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily. (189 aa)
GAB64295.1Putative D,D-heptose 1,7-bisphosphate phosphatase. (185 aa)
GAB64075.1Hypothetical protein. (442 aa)
rnfEElectron transport complex protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. (211 aa)
lpxD-2UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (346 aa)
GAB63809.1Hydrolase. (197 aa)
GAB63808.1Lipopolysaccharide heptosyltransferase. (365 aa)
GAB63776.1Heptosyltransferase. (372 aa)
GAB63761.1Conserved hypothetical protein. (354 aa)
GAB63694.13-deoxy-D-manno-octulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. (434 aa)
GAB63677.1Conserved hypothetical protein. (60 aa)
GAB63640.1Ubiquinone biosynthesis protein. (562 aa)
GAB63602.1Hypothetical protein. (408 aa)
GAB63600.1Putative glycosyltransferase. (383 aa)
GAB63598.1Protein kinase. (273 aa)
GAB63597.1Glycosyltransferase. (360 aa)
GAB63562.1Truncated DNA polymerase. (204 aa)
GAB63553.1Conserved hypothetical protein. (216 aa)
GAB63387.1Putative glycosyltransferase. (371 aa)
GAB63362.1Putative RNA-directed DNA polymerase. (204 aa)
GAB63201.1Conserved hypothetical protein. (452 aa)
GAB63010.1RNA-directed DNA polymerase. (257 aa)
GAB62982.1Lipid A biosynthesis acyltransferase. (287 aa)
kdsA2-dehydro-3-deoxyphosphooctonate aldolase; Belongs to the KdsA family. (302 aa)
lpxCUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. (299 aa)
GAB61412.1acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (296 aa)
GAB61424.1lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (384 aa)
GAB61476.1Conserved hypothetical protein; Belongs to the SIS family. GutQ/KpsF subfamily. (337 aa)
GAB61477.13-deoxy-D-manno-octulosonate 8-phosphate phosphatase. (176 aa)
GAB61614.1Putative glycosyltransferase. (374 aa)
lpxKTetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (363 aa)
cas1-2CRISPR-associated protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (771 aa)
GAB62502.1Putative 6-phospho-3-hexuloisomerase. (168 aa)
GAB62393.1Conserved hypothetical protein. (314 aa)
GAB62391.1Putative heptosyltransferase. (364 aa)
GAB62126.1RNA-directed DNA polymerase. (460 aa)
GAB61792.1Hypothetical protein. (91 aa)
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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