STRINGSTRING
Chro_0002 Chro_0002 Chro_0111 Chro_0111 Chro_0374 Chro_0374 Chro_1282 Chro_1282 Chro_2073 Chro_2073 Chro_2760 Chro_2760 Chro_2763 Chro_2763
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Chro_0002KEGG: npu:Npun_F0288 hypothetical protein; SPTR: Putative uncharacterized protein. (108 aa)
Chro_0111KEGG: naz:Aazo_4092 hypothetical protein; SPTR: Putative uncharacterized protein. (154 aa)
Chro_0374PFAM: Tryptophan-rich protein (DUF2389); TIGRFAM: tryptophan-rich conserved hypothetical protein; InterPro IPR012663; KEGG: npu:Npun_R4423 hypothetical protein; PFAM: Conserved hypothetical protein CHP02450, tryptophan-rich; SPTR: Putative uncharacterized protein. (100 aa)
Chro_1282Hypothetical protein; InterPro IPR017260; KEGG: ana:all4101 hypothetical protein; SPTR: Putative uncharacterized protein. (127 aa)
Chro_2073KEGG: npu:Npun_R0705 hypothetical protein; SPTR: Putative uncharacterized protein. (117 aa)
Chro_2760PFAM: Flavodoxin; Metallo-beta-lactamase superfamily; Flavin reductase like domain; COGs: COG0426 flavoprotein; InterPro IPR008254:IPR001226:IPR002563; KEGG: ava:Ava_1803 flavin reductase-like, FMN-binding; PFAM: flavin reductase domain protein FMN-binding; flavodoxin/nitric oxide synthase; SPTR: Flavin reductase-like, FMN-binding. (569 aa)
Chro_2763PFAM: Metallo-beta-lactamase superfamily; Flavin reductase like domain; COGs: COG0426 flavoprotein; InterPro IPR008254:IPR002563; KEGG: ava:Ava_1802 flavin reductase-like, FMN-binding; PFAM: flavin reductase domain protein FMN-binding; SPTR: Flavin reductase-like, FMN-binding. (573 aa)
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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