STRINGSTRING
Chro_1295 Chro_1295 Chro_5603 Chro_5603 Chro_5604 Chro_5604 Chro_5605 Chro_5605 Chro_5606 Chro_5606
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Chro_12953-dehydroquinate synthase; PFAM: Iron-containing alcohol dehydrogenase; COGs: COG0371 Glycerol dehydrogenase; InterPro IPR002658:IPR016205:IPR018211; KEGG: ana:alr2764 glycerol dehydrogenase; PFAM: 3-dehydroquinate synthase; SPTR: Glycerol dehydrogenase. (378 aa)
Chro_5603KEGG: pcb:PC000126.00.0 hypothetical protein; SPTR: Putative uncharacterized protein. (130 aa)
Chro_5604Hypothetical protein; KEGG: oan:Oant_3645 cytochrome c biogenesis protein transmembrane region; SPTR: Cytochrome c biogenesis protein transmembrane region. (88 aa)
Chro_5605PFAM: DAK2 domain; TIGRFAM: dihydroxyacetone kinase, phosphoprotein-dependent, L subunit; COGs: COG2376 Dihydroxyacetone kinase; InterPro IPR004007:IPR012737; KEGG: npu:Npun_R5519 dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; SPTR: Dihydroxyacetone kinase, L subunit; TIGRFAM: dihydroxyacetone kinase, L subunit. (208 aa)
Chro_5606PFAM: Dak1 domain; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; COGs: COG2376 Dihydroxyacetone kinase; InterPro IPR004006:IPR012736; KEGG: naz:Aazo_2074 dihydroxyacetone kinase subunit DhaK; PFAM: Dak kinase; PRIAM: Glycerone kinase; SPTR: Dihydroxyacetone kinase, DhaK subunit; TIGRFAM: dihydroxyacetone kinase, DhaK subunit. (355 aa)
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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