STRINGSTRING
Chro_0924 Chro_0924 Chro_4446 Chro_4446 Chro_5538 Chro_5538 Chro_0923 Chro_0923 Chro_5539 Chro_5539
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Chro_0924PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: pfo:Pfl01_5461 amino acid ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter, permease protein, putative; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit. (217 aa)
Chro_4446Arginine/lysine/histidine transporter system substrate-binding protein; PFAM: Binding-protein-dependent transport system inner membrane component; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG0765 ABC-type amino acid transport system permease component; InterProIPR001320:IPR001638:IPR000515:IPR018313:IPR 010065; KEGG: npu:Npun_F6325 polar amino acid ABC transporter, inner membrane subunit; PFAM: extracellular solute-binding protein family 3; binding-protein-dependent [...] (485 aa)
Chro_5538PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: ava:Ava_0738 amino acid ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Amino acid ABC transporter, permease protein, 3-TM region,His/Glu/Gln/Arg/opine; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; L-aspartate ABC transporter memb [...] (396 aa)
Chro_0923PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: azc:AZC_4405 amino acid ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter, permease protein, putative; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit. (224 aa)
Chro_5539PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG4597 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: ter:Tery_1999 polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC-type permease for basic amino acids and glutamine; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit. (386 aa)
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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