STRINGSTRING
EAQ02053.1 EAQ02053.1 pcm pcm EAQ01858.1 EAQ01858.1 EAQ01859.1 EAQ01859.1 EAQ01871.1 EAQ01871.1 EAQ01930.1 EAQ01930.1 cbiD cbiD EAQ03285.1 EAQ03285.1 trmFO trmFO EAQ03394.1 EAQ03394.1 EAQ03406.1 EAQ03406.1 EAQ03457.1 EAQ03457.1 ksgA ksgA EAQ03534.1 EAQ03534.1 EAQ03555.1 EAQ03555.1 EAQ01060.1 EAQ01060.1 prmC prmC rlmE rlmE EAQ01076.1 EAQ01076.1 EAQ01580.1 EAQ01580.1 EAQ01216.1 EAQ01216.1 EAQ04612.1 EAQ04612.1 EAQ04743.1 EAQ04743.1 EAQ04875.1 EAQ04875.1 EAQ04942.1 EAQ04942.1 EAQ04968.1 EAQ04968.1 EAQ05045.1 EAQ05045.1 rlmJ rlmJ rsmI rsmI EAQ05102.1 EAQ05102.1 EAQ05130.1 EAQ05130.1 secY secY EAQ04237.1 EAQ04237.1 EAQ04273.1 EAQ04273.1 EAQ04306.1 EAQ04306.1 EAQ04354.1 EAQ04354.1 EAQ04370.1 EAQ04370.1 EAQ04417.1 EAQ04417.1 EAQ04418.1 EAQ04418.1 EAQ04514.1 EAQ04514.1 EAQ04515.1 EAQ04515.1 EAQ04516.1 EAQ04516.1 EAQ04517.1 EAQ04517.1 EAQ03650.1 EAQ03650.1 EAQ03719.1 EAQ03719.1 EAQ03725.1 EAQ03725.1 EAQ03808.1 EAQ03808.1 rlmN rlmN EAQ03858.1 EAQ03858.1 ubiG ubiG EAQ04023.1 EAQ04023.1 EAQ04029.1 EAQ04029.1 rsmG rsmG ubiE ubiE EAQ03066.1 EAQ03066.1 EAQ03077.1 EAQ03077.1 trmD trmD EAQ03178.1 EAQ03178.1 EAQ03179.1 EAQ03179.1 rlmH rlmH EAQ01111.1 EAQ01111.1 EAQ01141.1 EAQ01141.1 EAQ01644.1 EAQ01644.1 EAQ01660.1 EAQ01660.1 trmB trmB EAQ02746.1 EAQ02746.1 thyA thyA prmA prmA EAQ02837.1 EAQ02837.1 rsmH rsmH EAQ01025.1 EAQ01025.1 EAQ02661.1 EAQ02661.1 EAQ02677.1 EAQ02677.1 EAQ01326.1 EAQ01326.1 EAQ01006.1 EAQ01006.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EAQ02053.1Hypothetical protein; Belongs to the UPF0261 family. (401 aa)
pcmprotein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. (217 aa)
EAQ01858.1Glycosyl transferase, group 2 family protein. (353 aa)
EAQ01859.1Methyltransferase, FkbM family protein; COG2520 Predicted methyltransferase. (253 aa)
EAQ01871.1COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain). (331 aa)
EAQ01930.1COG5598 Trimethylamine:corrinoid methyltransferase; Belongs to the trimethylamine methyltransferase family. (495 aa)
cbiDcobalt-precorrin-6A synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. (344 aa)
EAQ03285.1Possible NOL1/NOP2/sun family protein; COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (392 aa)
trmFOGlucose-inhibited division protein A; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. (455 aa)
EAQ03394.1RNA methyltransferase, TrmH family, group 3; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (265 aa)
EAQ03406.1Hypothetical protein; COG1092 Predicted SAM-dependent methyltransferases; Belongs to the methyltransferase superfamily. (400 aa)
EAQ03457.1COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain. (339 aa)
ksgADimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (279 aa)
EAQ03534.1RNA methyltransferase, TrmH family, group 1; COG0565 rRNA methylase. (244 aa)
EAQ03555.1COG5598 Trimethylamine:corrinoid methyltransferase; Belongs to the trimethylamine methyltransferase family. (515 aa)
EAQ01060.1Hypothetical protein; COG3963 Phospholipid N-methyltransferase. (185 aa)
prmCModification methylase, HemK family protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. (279 aa)
rlmERibosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. (238 aa)
EAQ01076.1Hypothetical protein; COG1410 Methionine synthase I, cobalamin-binding domain. (325 aa)
EAQ01580.1Cyclopropane-fatty-acyl-phospholipid synthase CfaS; COG2230 Cyclopropane fatty acid synthase and related methyltransferases. (402 aa)
EAQ01216.1Probable uroporphyrin-iii c-methyltransferase protein; COG0007 Uroporphyrinogen-III methylase; Belongs to the precorrin methyltransferase family. (275 aa)
EAQ04612.1Hypothetical protein. (60 aa)
EAQ04743.1COG0350 Methylated DNA-protein cysteine methyltransferase. (153 aa)
EAQ04875.1Hypothetical ada regulatory protein; COG2169 Adenosine deaminase. (95 aa)
EAQ04942.1COG0286 Type I restriction-modification system methyltransferase subunit. (512 aa)
EAQ04968.1O-methyltransferase, family 2; COG0500 SAM-dependent methyltransferases. (337 aa)
EAQ05045.1Hypothetical protein. (362 aa)
rlmJHypothetical protein; Specifically methylates the adenine in position 2030 of 23S rRNA. (257 aa)
rsmIHypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (288 aa)
EAQ05102.1Type II DNA modification methyltransferase, putative; COG4725 Transcriptional activator, adenine-specific DNA methyltransferase; Belongs to the MT-A70-like family. (202 aa)
EAQ05130.1Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. (241 aa)
secYPreprotein translocase SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (456 aa)
EAQ04237.1COG2518 Protein-L-isoaspartate carboxylmethyltransferase. (217 aa)
EAQ04273.1Putative integral membrane binding protein dependent transportprotein; COG0395 ABC-type sugar transport system, permease component. (404 aa)
EAQ04306.1Hypothetical protein; COG0500 SAM-dependent methyltransferases. (251 aa)
EAQ04354.1Hypothetical protein; COG0500 SAM-dependent methyltransferases. (219 aa)
EAQ04370.1Hypothetical protein. (282 aa)
EAQ04417.1Hypothetical protein; COG4123 Predicted O-methyltransferase; Belongs to the methyltransferase superfamily. (257 aa)
EAQ04418.1Hypothetical protein. (71 aa)
EAQ04514.1COG2875 Precorrin-4 methylase. (258 aa)
EAQ04515.1COG2073 Cobalamin biosynthesis protein CbiG. (615 aa)
EAQ04516.1precorrin-3B C17-methyltransferase; COG2243 Precorrin-2 methylase; Belongs to the precorrin methyltransferase family. (236 aa)
EAQ04517.1CobL, precorrin-6Y C5,15-methyltransferase; COG2241 Precorrin-6B methylase 1. (400 aa)
EAQ03650.1Methyltransferase, putative; COG2813 16S RNA G1207 methylase RsmC; Belongs to the methyltransferase superfamily. (337 aa)
EAQ03719.1Methyltransferase, putative; COG0742 N6-adenine-specific methylase. (184 aa)
EAQ03725.1Methyltransferase, UbiE/COQ5 family protein; COG0500 SAM-dependent methyltransferases. (207 aa)
EAQ03808.1Ribosomal RNA small subunit methyltransferase B, putative; COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (465 aa)
rlmNRadical SAM superfamily protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. (398 aa)
EAQ03858.1Hypothetical protein; COG0500 SAM-dependent methyltransferases. (195 aa)
ubiG3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. (247 aa)
EAQ04023.1Hypothetical protein; COG0500 SAM-dependent methyltransferases. (274 aa)
EAQ04029.123S rRNA (Uracil-5-)-methyltransferase rumA; COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (405 aa)
rsmGGlucose-inhibited division protein B; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. (201 aa)
ubiEUbiquinone/menaquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (248 aa)
EAQ03066.1Methyltransferase, FkbM family protein; COG0500 SAM-dependent methyltransferases. (289 aa)
EAQ03077.1Hypothetical protein; COG0116 Predicted N6-adenine-specific DNA methylase. (369 aa)
trmDtRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. (263 aa)
EAQ03178.1Zinc/manganese/iron ABC transporter, permease protein; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components. (394 aa)
EAQ03179.1Zinc/manganese/iron ABC transporter, permease protein; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components. (304 aa)
rlmHHypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. (156 aa)
EAQ01111.1ADA regulatory protein; COG2207 AraC-type DNA-binding domain-containing proteins. (283 aa)
EAQ01141.1COG0395 ABC-type sugar transport system, permease component. (286 aa)
EAQ01644.1COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. (363 aa)
EAQ01660.1ABC zinc transporter, inner membrane subunit ZnuB; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components. (268 aa)
trmBtRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (236 aa)
EAQ02746.1ABC sugar (glycerol) transporter, inner membrane subunit; COG0395 ABC-type sugar transport system, permease component. (293 aa)
thyAThymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. (298 aa)
prmARibosomal protein L11 methyltransferase, putative; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. (290 aa)
EAQ02837.1COG4106 Trans-aconitate methyltransferase. (265 aa)
rsmHS-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (331 aa)
EAQ01025.1Hypothetical protein. (1420 aa)
EAQ02661.1Hypothetical protein; COG0286 Type I restriction-modification system methyltransferase subunit. (1419 aa)
EAQ02677.1Hypothetical protein; COG0286 Type I restriction-modification system methyltransferase subunit. (1035 aa)
EAQ01326.1Putative methylase/helicase; COG2263 Predicted RNA methylase. (1436 aa)
EAQ01006.1COG3392 Adenine-specific DNA methylase. (155 aa)
Your Current Organism:
Pseudooceanicola batsensis
NCBI taxonomy Id: 252305
Other names: Oceanicola batsensis HTCC2597, Oceanicola batsensis KCTC 12145, P. batsensis HTCC2597, Pseudooceanicola batsensis HTCC2597, Pseudooceanicola batsensis KCTC 12145
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