STRINGSTRING
EAQ01859.1 EAQ01859.1 pcm pcm EAQ01006.1 EAQ01006.1 EAQ02677.1 EAQ02677.1 rsmH rsmH EAQ02837.1 EAQ02837.1 trmB trmB EAQ01660.1 EAQ01660.1 EAQ01644.1 EAQ01644.1 rlmH rlmH EAQ03179.1 EAQ03179.1 EAQ03178.1 EAQ03178.1 trmD trmD ubiE ubiE rsmG rsmG ubiG ubiG rlmN rlmN EAQ03725.1 EAQ03725.1 EAQ03650.1 EAQ03650.1 EAQ04517.1 EAQ04517.1 EAQ04516.1 EAQ04516.1 EAQ04515.1 EAQ04515.1 EAQ04514.1 EAQ04514.1 EAQ04418.1 EAQ04418.1 EAQ04417.1 EAQ04417.1 EAQ04237.1 EAQ04237.1 EAQ05102.1 EAQ05102.1 rsmI rsmI rlmJ rlmJ EAQ01216.1 EAQ01216.1 EAQ01580.1 EAQ01580.1 rlmE rlmE prmC prmC ksgA ksgA EAQ03406.1 EAQ03406.1 EAQ01871.1 EAQ01871.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EAQ01859.1Methyltransferase, FkbM family protein; COG2520 Predicted methyltransferase. (253 aa)
pcmprotein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. (217 aa)
EAQ01006.1COG3392 Adenine-specific DNA methylase. (155 aa)
EAQ02677.1Hypothetical protein; COG0286 Type I restriction-modification system methyltransferase subunit. (1035 aa)
rsmHS-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (331 aa)
EAQ02837.1COG4106 Trans-aconitate methyltransferase. (265 aa)
trmBtRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (236 aa)
EAQ01660.1ABC zinc transporter, inner membrane subunit ZnuB; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components. (268 aa)
EAQ01644.1COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. (363 aa)
rlmHHypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. (156 aa)
EAQ03179.1Zinc/manganese/iron ABC transporter, permease protein; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components. (304 aa)
EAQ03178.1Zinc/manganese/iron ABC transporter, permease protein; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components. (394 aa)
trmDtRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. (263 aa)
ubiEUbiquinone/menaquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (248 aa)
rsmGGlucose-inhibited division protein B; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. (201 aa)
ubiG3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. (247 aa)
rlmNRadical SAM superfamily protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. (398 aa)
EAQ03725.1Methyltransferase, UbiE/COQ5 family protein; COG0500 SAM-dependent methyltransferases. (207 aa)
EAQ03650.1Methyltransferase, putative; COG2813 16S RNA G1207 methylase RsmC; Belongs to the methyltransferase superfamily. (337 aa)
EAQ04517.1CobL, precorrin-6Y C5,15-methyltransferase; COG2241 Precorrin-6B methylase 1. (400 aa)
EAQ04516.1precorrin-3B C17-methyltransferase; COG2243 Precorrin-2 methylase; Belongs to the precorrin methyltransferase family. (236 aa)
EAQ04515.1COG2073 Cobalamin biosynthesis protein CbiG. (615 aa)
EAQ04514.1COG2875 Precorrin-4 methylase. (258 aa)
EAQ04418.1Hypothetical protein. (71 aa)
EAQ04417.1Hypothetical protein; COG4123 Predicted O-methyltransferase; Belongs to the methyltransferase superfamily. (257 aa)
EAQ04237.1COG2518 Protein-L-isoaspartate carboxylmethyltransferase. (217 aa)
EAQ05102.1Type II DNA modification methyltransferase, putative; COG4725 Transcriptional activator, adenine-specific DNA methyltransferase; Belongs to the MT-A70-like family. (202 aa)
rsmIHypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (288 aa)
rlmJHypothetical protein; Specifically methylates the adenine in position 2030 of 23S rRNA. (257 aa)
EAQ01216.1Probable uroporphyrin-iii c-methyltransferase protein; COG0007 Uroporphyrinogen-III methylase; Belongs to the precorrin methyltransferase family. (275 aa)
EAQ01580.1Cyclopropane-fatty-acyl-phospholipid synthase CfaS; COG2230 Cyclopropane fatty acid synthase and related methyltransferases. (402 aa)
rlmERibosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. (238 aa)
prmCModification methylase, HemK family protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. (279 aa)
ksgADimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (279 aa)
EAQ03406.1Hypothetical protein; COG1092 Predicted SAM-dependent methyltransferases; Belongs to the methyltransferase superfamily. (400 aa)
EAQ01871.1COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain). (331 aa)
Your Current Organism:
Pseudooceanicola batsensis
NCBI taxonomy Id: 252305
Other names: Oceanicola batsensis HTCC2597, Oceanicola batsensis KCTC 12145, P. batsensis HTCC2597, Pseudooceanicola batsensis HTCC2597, Pseudooceanicola batsensis KCTC 12145
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