Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ01171.1 | EAQ03471.1 | OB2597_03744 | OB2597_02587 | PQQ enzyme repeat family protein; COG1520 FOG: WD40-like repeat. | PPIC-type PPIASE domain protein; COG0760 Parvulin-like peptidyl-prolyl isomerase. | 0.965 |
| EAQ01171.1 | bamA | OB2597_03744 | OB2597_01792 | PQQ enzyme repeat family protein; COG1520 FOG: WD40-like repeat. | Outer membrane protein, OMP85 family protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.987 |
| EAQ01171.1 | bamD | OB2597_03744 | OB2597_16220 | PQQ enzyme repeat family protein; COG1520 FOG: WD40-like repeat. | Putative ComL lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.975 |
| EAQ01171.1 | lptD | OB2597_03744 | OB2597_02592 | PQQ enzyme repeat family protein; COG1520 FOG: WD40-like repeat. | Organic solvent tolerance protein, putative; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.594 |
| EAQ03471.1 | EAQ01171.1 | OB2597_02587 | OB2597_03744 | PPIC-type PPIASE domain protein; COG0760 Parvulin-like peptidyl-prolyl isomerase. | PQQ enzyme repeat family protein; COG1520 FOG: WD40-like repeat. | 0.965 |
| EAQ03471.1 | bamA | OB2597_02587 | OB2597_01792 | PPIC-type PPIASE domain protein; COG0760 Parvulin-like peptidyl-prolyl isomerase. | Outer membrane protein, OMP85 family protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.803 |
| EAQ03471.1 | bamD | OB2597_02587 | OB2597_16220 | PPIC-type PPIASE domain protein; COG0760 Parvulin-like peptidyl-prolyl isomerase. | Putative ComL lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.546 |
| EAQ03471.1 | lptD | OB2597_02587 | OB2597_02592 | PPIC-type PPIASE domain protein; COG0760 Parvulin-like peptidyl-prolyl isomerase. | Organic solvent tolerance protein, putative; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.957 |
| EAQ03876.1 | lptD | OB2597_11551 | OB2597_02592 | Lipoprotein, putative. | Organic solvent tolerance protein, putative; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.694 |
| EAQ03940.1 | bamA | OB2597_11871 | OB2597_01792 | COG1934 Uncharacterized protein conserved in bacteria. | Outer membrane protein, OMP85 family protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.588 |
| EAQ03940.1 | lptD | OB2597_11871 | OB2597_02592 | COG1934 Uncharacterized protein conserved in bacteria. | Organic solvent tolerance protein, putative; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.967 |
| bamA | EAQ01171.1 | OB2597_01792 | OB2597_03744 | Outer membrane protein, OMP85 family protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | PQQ enzyme repeat family protein; COG1520 FOG: WD40-like repeat. | 0.987 |
| bamA | EAQ03471.1 | OB2597_01792 | OB2597_02587 | Outer membrane protein, OMP85 family protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | PPIC-type PPIASE domain protein; COG0760 Parvulin-like peptidyl-prolyl isomerase. | 0.803 |
| bamA | EAQ03940.1 | OB2597_01792 | OB2597_11871 | Outer membrane protein, OMP85 family protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | COG1934 Uncharacterized protein conserved in bacteria. | 0.588 |
| bamA | bamD | OB2597_01792 | OB2597_16220 | Outer membrane protein, OMP85 family protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Putative ComL lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.993 |
| bamA | lptD | OB2597_01792 | OB2597_02592 | Outer membrane protein, OMP85 family protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Organic solvent tolerance protein, putative; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.797 |
| bamD | EAQ01171.1 | OB2597_16220 | OB2597_03744 | Putative ComL lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | PQQ enzyme repeat family protein; COG1520 FOG: WD40-like repeat. | 0.975 |
| bamD | EAQ03471.1 | OB2597_16220 | OB2597_02587 | Putative ComL lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | PPIC-type PPIASE domain protein; COG0760 Parvulin-like peptidyl-prolyl isomerase. | 0.546 |
| bamD | bamA | OB2597_16220 | OB2597_01792 | Putative ComL lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Outer membrane protein, OMP85 family protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.993 |
| bamD | lptD | OB2597_16220 | OB2597_02592 | Putative ComL lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Organic solvent tolerance protein, putative; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.614 |
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