26 items (Verruconis gallopava) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV09_07915	Uncharacterized protein. (578 aa)
	PV09_03184	EXPERA domain-containing protein. (200 aa)
	PV09_09698	Uncharacterized protein. (123 aa)
	PV09_06042	Uncharacterized protein. (297 aa)
	PV09_05141	Uncharacterized protein. (328 aa)
	PV09_04867	Zn(2)-C6 fungal-type domain-containing protein. (952 aa)
	PV09_00532	Uncharacterized protein. (312 aa)
	PV09_07739	Uncharacterized protein. (180 aa)
	PV09_07498	Uncharacterized protein. (672 aa)
	PV09_06450	Uncharacterized protein. (1208 aa)
	PV09_06201	Uncharacterized protein. (141 aa)
	PV09_05721	Uncharacterized protein. (634 aa)
	PV09_02892	Uncharacterized protein. (326 aa)
	PV09_02931	C2 NT-type domain-containing protein. (348 aa)
	PV09_02614	Uncharacterized protein. (524 aa)
	PV09_01944	Uncharacterized protein. (386 aa)
	PV09_02469	Uncharacterized protein. (705 aa)
	PV09_08746	Uncharacterized protein. (768 aa)
	PV09_08698	Uncharacterized protein. (1081 aa)
	PV09_01623	HTH APSES-type domain-containing protein. (444 aa)
	PV09_01291	DUF1768 domain-containing protein. (184 aa)
	PV09_00485	Uncharacterized protein. (576 aa)
	PV09_00497	Uncharacterized protein. (300 aa)
	PV09_05284	Uncharacterized protein. (633 aa)
	PV09_04914	Uncharacterized protein. (619 aa)
	PV09_01474	Uncharacterized protein. (683 aa)

Your Current Organism:

Verruconis gallopava

NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV09_00485	PV09_00497	A0A0D2ASD6	A0A0D2AT05	Uncharacterized protein.	Uncharacterized protein.	0.420
PV09_00485	PV09_01474	A0A0D2ASD6	A0A0D2B8I3	Uncharacterized protein.	Uncharacterized protein.	0.429
PV09_00485	PV09_02469	A0A0D2ASD6	A0A0D2AJM9	Uncharacterized protein.	Uncharacterized protein.	0.420
PV09_00485	PV09_02892	A0A0D2ASD6	A0A0D2AHT5	Uncharacterized protein.	Uncharacterized protein.	0.510
PV09_00485	PV09_04867	A0A0D2ASD6	A0A0D1YTT4	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.439
PV09_00485	PV09_04914	A0A0D2ASD6	A0A0D2AY78	Uncharacterized protein.	Uncharacterized protein.	0.510
PV09_00485	PV09_05141	A0A0D2ASD6	A0A0D1YT78	Uncharacterized protein.	Uncharacterized protein.	0.429
PV09_00485	PV09_05721	A0A0D2ASD6	A0A0D2A956	Uncharacterized protein.	Uncharacterized protein.	0.510
PV09_00485	PV09_07498	A0A0D2ASD6	A0A0D2A3J2	Uncharacterized protein.	Uncharacterized protein.	0.510
PV09_00485	PV09_07915	A0A0D2ASD6	A0A0D1XEG4	Uncharacterized protein.	Uncharacterized protein.	0.429
PV09_00485	PV09_09698	A0A0D2ASD6	A0A0D1YCW1	Uncharacterized protein.	Uncharacterized protein.	0.420
PV09_00497	PV09_00485	A0A0D2AT05	A0A0D2ASD6	Uncharacterized protein.	Uncharacterized protein.	0.420
PV09_00497	PV09_01291	A0A0D2AT05	A0A0D2AP92	Uncharacterized protein.	DUF1768 domain-containing protein.	0.420
PV09_00497	PV09_01944	A0A0D2AT05	A0A0D2AJK1	Uncharacterized protein.	Uncharacterized protein.	0.420
PV09_00497	PV09_02614	A0A0D2AT05	A0A0D2AJ73	Uncharacterized protein.	Uncharacterized protein.	0.420
PV09_00497	PV09_03184	A0A0D2AT05	A0A0D1XTI2	Uncharacterized protein.	EXPERA domain-containing protein.	0.420
PV09_00497	PV09_05284	A0A0D2AT05	A0A0D2AWL4	Uncharacterized protein.	Uncharacterized protein.	0.420
PV09_00497	PV09_06201	A0A0D2AT05	A0A0D2A716	Uncharacterized protein.	Uncharacterized protein.	0.420
PV09_00497	PV09_06450	A0A0D2AT05	A0A0D2A6D0	Uncharacterized protein.	Uncharacterized protein.	0.420
PV09_00497	PV09_07739	A0A0D2AT05	A0A0D2A1X2	Uncharacterized protein.	Uncharacterized protein.	0.420

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